Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 RNU6-582P-201ENST00000362989 107 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 RNA5SP332-201ENST00000391063 115 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AL139098.1-201ENST00000407291 389 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 SNORA77-201ENST00000408716 125 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 BX510359.2-201ENST00000417920 305 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 OR6C64P-201ENST00000419708 825 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 RPS26P40-201ENST00000435209 294 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 MTCYBP39-201ENST00000437562 491 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 ARL4AP3-201ENST00000441452 574 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC004865.1-201ENST00000442276 1003 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC118469.1-201ENST00000442943 488 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AL606662.1-201ENST00000445763 553 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC239809.1-201ENST00000450470 217 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AURKAPS2-201ENST00000454983 333 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC091180.1-201ENST00000462104 372 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 MTND1P16-201ENST00000465177 898 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 CCDC75P1-201ENST00000469247 791 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 BZW1P2-201ENST00000473537 826 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC111000.2-201ENST00000507775 550 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 XKRY-201ENST00000510392 1100 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 RN7SKP276-201ENST00000516242 268 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 RNU6-885P-201ENST00000516607 104 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AF279873.1-201ENST00000523393 313 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC024909.2-201ENST00000553035 286 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 ISCA1P3-201ENST00000577104 373 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 MIR4801-201ENST00000582704 82 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC110743.1-201ENST00000584870 478 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 DUXAP11-201ENST00000603858 526 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC010632.3-201ENST00000611377 369 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC015804.1-201ENST00000622935 435 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC098679.5-201ENST00000624394 571 ntBASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC187A0A096LP49 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 USP9YP4-201ENST00000424401 1745 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 Y_RNA.51-201ENST00000362725 102 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 RNU5D-1-201ENST00000363299 116 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 RNU6-931P-201ENST00000363850 107 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 RNU6-621P-201ENST00000364752 109 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 Y_RNA.311-201ENST00000365068 96 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 RNU6-146P-201ENST00000384602 108 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 SNORD116-23-201ENST00000384645 92 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 AL133264.1-201ENST00000407157 562 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 RPL18P10-201ENST00000425606 538 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 AL158073.1-201ENST00000426848 1104 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 AC009238.2-201ENST00000431026 355 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 AL050321.1-201ENST00000432363 400 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 RPL36AP15-201ENST00000444514 266 ntBASIC4.75□□□□□ -1.65
CCDC187A0A096LP49 AC012512.1-201ENST00000446594 718 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms