Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 SEC63P2-201ENST00000503863 1939 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AL118496.1-201ENST00000440201 1812 ntBASIC5.71□□□□□ -1.49
CTDP1Q9Y5B0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CTDP1Q9Y5B0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
CTDP1Q9Y5B0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 RNU6-517P-201ENST00000384362 110 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 TAF9BP1-201ENST00000396646 746 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC013442.1-201ENST00000397347 228 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 Y_RNA.604-201ENST00000410574 102 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 RN7SKP222-201ENST00000410651 315 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 GPS2P1-201ENST00000411761 986 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 VTA1P1-201ENST00000414044 866 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AL807761.1-201ENST00000417622 171 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC019050.1-201ENST00000418508 492 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 MTND4LP11-201ENST00000422184 280 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 HMGB3P9-201ENST00000441799 583 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 RPL21P134-201ENST00000453468 483 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 RPS29P33-201ENST00000456717 146 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 RPS6P4-201ENST00000494693 758 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC104090.1-201ENST00000506341 1171 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AP001880.2-201ENST00000538233 448 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC079075.1-201ENST00000559543 878 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC027104.1-201ENST00000563702 681 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC233702.9-201ENST00000581528 203 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 MIR3611-201ENST00000584484 83 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC073648.5-201ENST00000603502 305 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AL049794.2-201ENST00000616301 365 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC073968.1-201ENST00000618594 637 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC073534.2-201ENST00000620377 381 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC008443.7-201ENST00000622195 246 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC092192.1-201ENST00000633154 1018 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC087821.2-201ENST00000637086 450 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 ZNF833P-201ENST00000424938 1494 ntBASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CTDP1Q9Y5B0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 IL6STP1-201ENST00000346911 1020 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 RNU6-1200P-201ENST00000384162 107 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 MT-TH-201ENST00000387441 69 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 SNORA26.8-201ENST00000391306 124 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AP000357.1-201ENST00000409926 1165 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AC119751.6-201ENST00000416712 186 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 P2RY10P2-201ENST00000416730 913 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AC093414.1-201ENST00000434712 514 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AC234064.1-201ENST00000436312 247 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 RPL23AP76-201ENST00000441860 458 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AC005002.1-201ENST00000447458 540 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AC073264.2-201ENST00000448886 166 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AC010733.1-201ENST00000451515 401 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 PPIAP21-201ENST00000464473 501 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 RPL23AP72-201ENST00000492447 435 ntBASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.7□□□□□ -1.5
CTDP1Q9Y5B0 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms