Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SNORA70E-201ENST00000384492 135 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 MIR659-201ENST00000384963 97 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 DNAJC19P6-201ENST00000401853 280 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AL606495.1-201ENST00000422100 813 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AL049610.1-201ENST00000423374 372 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 CHEK2P5-201ENST00000423877 246 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 OR4F13P-201ENST00000428478 931 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AC011742.1-201ENST00000431448 434 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 VN1R25P-201ENST00000443385 738 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 VN1R40P-201ENST00000455196 941 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AC008280.2-201ENST00000455473 307 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 snoU13.7-201ENST00000459220 104 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AC005532.2-201ENST00000467154 373 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 RPL7AP6-201ENST00000477943 801 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AP001086.1-201ENST00000494882 321 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AC021146.1-201ENST00000511202 716 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 OR5M2P-201ENST00000529003 936 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AP001781.1-201ENST00000530977 207 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AC005255.1-201ENST00000593748 216 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AL031320.1-201ENST00000604177 357 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 RNA5SP108-201ENST00000605921 117 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AC096586.1-201ENST00000610267 561 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 uc_338.13-201ENST00000618243 179 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AC095038.2-201ENST00000621464 1070 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AL773545.4-201ENST00000637262 310 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 FAM157B-203ENST00000639350 358 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AL513478.4-201ENST00000641636 310 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 AC011978.2-201ENST00000569835 2054 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 SAGE4P-201ENST00000442271 3381 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 IPO8P1-201ENST00000455509 3109 ntBASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 SNORA11C-201ENST00000408532 129 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 PGBD4P8-201ENST00000412993 562 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AL355433.1-201ENST00000422804 300 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 VDAC1P6-201ENST00000430062 855 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AL512661.1-201ENST00000434586 1253 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AC074367.1-201ENST00000438685 1125 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 UBE2V1P5-201ENST00000440070 405 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 PPIAP3-201ENST00000450588 505 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 DNAJC19P8-201ENST00000452887 259 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AC091685.2-201ENST00000454924 864 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 MTCO3P20-201ENST00000454926 688 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 DHFRP3-201ENST00000455595 559 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 RPL36AP13-201ENST00000457490 317 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AC010307.1-201ENST00000467206 836 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 RPL23AP14-201ENST00000468281 468 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AC012170.1-201ENST00000495139 359 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 RPL7L1P13-201ENST00000511702 739 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 IGKV1-32-201ENST00000519290 311 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 HMGN2P6-201ENST00000551091 273 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 PCNPP1-201ENST00000552501 511 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AL389895.1-201ENST00000554127 252 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AC079148.1-201ENST00000565944 819 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AC006065.5-201ENST00000623427 349 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AC073592.7-201ENST00000623659 507 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 AL049536.1-201ENST00000625043 744 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 U6.98-201ENST00000637157 84 ntBASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms