Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC007603.3-201ENST00000636915 979 ntBASIC7.11□□□□□ -1.27
VPS9D1Q9Y2B5 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
VPS9D1Q9Y2B5 AC079178.2-201ENST00000439323 1624 ntBASIC7.11□□□□□ -1.27
VPS9D1Q9Y2B5 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.11□□□□□ -1.27
VPS9D1Q9Y2B5 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VPS9D1Q9Y2B5 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VPS9D1Q9Y2B5 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
VPS9D1Q9Y2B5 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VPS9D1Q9Y2B5 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
VPS9D1Q9Y2B5 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.11□□□□□ -1.27
VPS9D1Q9Y2B5 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.11□□□□□ -1.27
VPS9D1Q9Y2B5 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VPS9D1Q9Y2B5 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AC092111.1-201ENST00000618256 3358 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 BDP1P-201ENST00000582658 1990 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 NHP2P2-201ENST00000396362 460 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 MIR1231-201ENST00000408101 92 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 RNU2-6P-201ENST00000411404 190 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 FTH1P1-201ENST00000437933 532 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AL161626.1-201ENST00000441480 490 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 RPL21P89-201ENST00000444021 467 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 CYCSP34-201ENST00000458172 304 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 RPS14P8-201ENST00000478778 369 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 RPS10P20-201ENST00000494130 463 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AC068305.1-201ENST00000497406 726 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 FTH1P8-201ENST00000498161 514 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AC020893.1-201ENST00000502452 580 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 Y_RNA.662-201ENST00000516028 97 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AC012339.2-201ENST00000523996 453 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 NDUFA3P4-201ENST00000560814 250 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AL031846.1-201ENST00000560933 314 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 MIR3144-201ENST00000579460 79 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AC006116.6-201ENST00000593258 1103 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AC008162.1-201ENST00000604718 254 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AL670379.4-201ENST00000605279 254 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AC123768.4-201ENST00000616244 701 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AC009902.3-201ENST00000606235 2172 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 AC089998.1-201ENST00000548575 3141 ntBASIC7.1□□□□□ -1.27
VPS9D1Q9Y2B5 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 SNORA23-201ENST00000365128 182 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 RNU6-215P-201ENST00000365169 102 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 RNU6-444P-201ENST00000383988 108 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 RNU6-804P-201ENST00000384286 107 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 AC114491.1-201ENST00000416095 246 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 AL161742.1-201ENST00000418154 584 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms