Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 AC024341.1-201ENST00000526444 1552 ntBASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 RPS24P12-201ENST00000402084 394 ntBASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 NPM1P48-201ENST00000436002 853 ntBASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 AC096576.1-201ENST00000489014 359 ntBASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 AC022882.1-201ENST00000532142 501 ntBASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 AC006539.2-201ENST00000601729 572 ntBASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 AC138932.5-201ENST00000617759 563 ntBASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 AL645937.1-201ENST00000641739 1652 ntBASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PHRF1Q9P1Y6 AC093849.1-201ENST00000563631 2209 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 GSTA8P-201ENST00000404253 637 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 AC025750.2-201ENST00000442609 450 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 TMED11P-201ENST00000479478 690 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 FCF1P8-201ENST00000510322 597 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 AC074276.2-201ENST00000619891 348 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 AC006386.2-201ENST00000624491 75 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 AC012005.1-201ENST00000624575 75 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 KPNA2P2-201ENST00000419546 1489 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 AC092435.4-201ENST00000623012 4159 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 AL078595.2-201ENST00000605309 1780 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 SNORD74.4-201ENST00000364129 80 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 MIR93-201ENST00000385024 80 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 AL603766.1-201ENST00000407763 664 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 RNA5SP104-201ENST00000410989 118 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 RNF19BPX-201ENST00000426224 625 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 HMGB3P22-202ENST00000451823 572 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 AC097262.1-201ENST00000452559 548 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 RPL7P38-201ENST00000488396 739 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 RPL5P23-201ENST00000496040 868 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 AL121594.4-201ENST00000556211 1196 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 AC233280.2-201ENST00000603917 1070 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 AC073657.2-201ENST00000605661 303 ntBASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHRF1Q9P1Y6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 RNA5SP432-201ENST00000362480 116 ntBASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 USP12PY-201ENST00000427677 1064 ntBASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 DDX6P1-205ENST00000441966 1436 ntBASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 RN7SL594P-201ENST00000470590 287 ntBASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
PHRF1Q9P1Y6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 ANKRD36P1-201ENST00000344424 659 ntBASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 OR1AA1P-201ENST00000419597 916 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms