Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC006120.1-201ENST00000579375 546 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 SNORD39.3-201ENST00000584451 71 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 AL139124.1-201ENST00000609123 421 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 MIR6503-201ENST00000622884 86 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 AP002907.1-201ENST00000606361 1430 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSU72Q9NP77 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSU72Q9NP77 AL137141.1-201ENST00000624622 4836 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC217777.1-201ENST00000570034 1471 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 RNU5E-1-201ENST00000362477 120 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 RNU4-1-201ENST00000363925 141 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC096921.1-201ENST00000411661 375 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AL133482.1-201ENST00000415988 498 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 RNF10P1-201ENST00000418589 369 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 MTCO3P46-201ENST00000425787 232 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AL365400.1-201ENST00000431854 640 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 RPS3AP54-201ENST00000435535 734 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 RPS10P14-201ENST00000440748 502 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC234771.4-201ENST00000441416 730 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC103851.1-201ENST00000506833 274 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 RNA5SP401-201ENST00000515920 127 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 SNORA74.1-201ENST00000516320 180 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC104986.1-201ENST00000517978 436 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 PMS2P3-207ENST00000529061 717 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC023050.3-201ENST00000541142 333 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 AL352979.3-201ENST00000553515 247 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC091304.5-201ENST00000568969 158 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 TXNP4-201ENST00000575018 310 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 MIR4660-201ENST00000583549 74 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 OR7E19P-202ENST00000589942 844 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 BNIP3P22-201ENST00000593399 556 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC008966.2-201ENST00000606157 453 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 uc_338.9-201ENST00000617424 182 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 AC100810.6-201ENST00000638068 285 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSU72Q9NP77 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 CASC19-204ENST00000641001 2055 ntBASIC5.79□□□□□ -1.48
SSU72Q9NP77 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSU72Q9NP77 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSU72Q9NP77 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SSU72Q9NP77 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSU72Q9NP77 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSU72Q9NP77 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSU72Q9NP77 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 BCORP1-203ENST00000513194 5093 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSU72Q9NP77 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSU72Q9NP77 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 RNU6-343P-201ENST00000364709 104 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 RN7SKP186-201ENST00000365371 303 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 Y_RNA.431-201ENST00000384086 102 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 RN7SKP32-201ENST00000410167 303 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms