Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 SNORD113-6-201ENST00000363345 75 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC004975.1-201ENST00000428733 208 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 NMNAT1P2-201ENST00000435192 860 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC090142.1-201ENST00000465776 462 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 MTND3P7-201ENST00000474435 343 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC025459.1-201ENST00000504072 156 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 MTCO3P7-201ENST00000510008 774 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 OR8I1P-201ENST00000529291 931 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 FKBP1BP1-201ENST00000553366 325 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AGGF1P8-201ENST00000562979 1000 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AP002906.1-201ENST00000603405 233 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC115286.1-201ENST00000604298 434 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC064872.1-201ENST00000604823 1072 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC103591.3-201ENST00000608684 209 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC012409.3-201ENST00000611343 981 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC005086.4-201ENST00000623065 213 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC091965.5-201ENST00000624785 342 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 ZNF849P-201ENST00000594711 1566 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 ZFRP1-201ENST00000457579 2970 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 AC107068.1-201ENST00000563286 4218 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 AC095050.2-201ENST00000510748 1458 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 Y_RNA.472-201ENST00000384322 102 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 MIR659-201ENST00000384963 97 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 RPL7P27-201ENST00000403775 720 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 LINC01881-201ENST00000416103 412 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 AC011233.1-201ENST00000422812 283 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 EIF4HP2-201ENST00000424380 563 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 MTCO2P16-201ENST00000436962 677 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 ISCA1P2-201ENST00000438679 421 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 FHP1-201ENST00000442741 703 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 TPTE2P6-202ENST00000445572 1007 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 NUTF2P7-201ENST00000453086 375 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 GTF2IP12-201ENST00000456547 356 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 RPL23AP24-201ENST00000458203 385 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 RN7SL41P-201ENST00000476144 297 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 MTCO2P32-201ENST00000514865 403 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 MIR4789-201ENST00000577469 82 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 MIR3939-201ENST00000582614 106 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 RN7SL622P-201ENST00000585292 275 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 AC105129.3-201ENST00000605455 485 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 AP002360.4-201ENST00000606980 481 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 AC091979.2-201ENST00000607514 214 ntBASIC4.77□□□□□ -1.65
EBF3Q9H4W6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.77□□□□□ -1.65
EBF3Q9H4W6 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms