Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RPS3AP2-201ENST00000407190 754 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 RNU6-575P-201ENST00000411326 105 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.36□□□□□ -1.55
VPS11Q9H270 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AC007738.1-201ENST00000413892 348 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS11Q9H270 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.36□□□□□ -1.55
VPS11Q9H270 C1DP2-201ENST00000418167 426 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 Z97055.1-201ENST00000419730 712 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 PAICSP7-201ENST00000419829 962 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC104333.2-201ENST00000422630 192 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AL133173.1-201ENST00000423458 397 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AL590103.1-201ENST00000434488 307 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 RPS26P40-201ENST00000435209 294 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS11Q9H270 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AL137845.2-201ENST00000444292 988 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC073909.1-201ENST00000447112 999 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.36□□□□□ -1.55
VPS11Q9H270 MTND1P18-201ENST00000448191 573 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC239809.1-201ENST00000450470 217 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 PPIAP21-201ENST00000464473 501 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AP000852.1-201ENST00000472460 573 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS11Q9H270 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS11Q9H270 RPS27P23-201ENST00000487608 251 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 RPL37P23-201ENST00000492641 294 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC069439.1-201ENST00000494739 167 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS11Q9H270 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS11Q9H270 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AC117522.3-201ENST00000507974 584 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS11Q9H270 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AC068993.1-201ENST00000546724 589 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AC107958.1-201ENST00000556576 290 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 MIR4472-2-201ENST00000582069 67 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 MIR3936-201ENST00000584304 110 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC110743.1-201ENST00000584870 478 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AC015871.2-201ENST00000603605 948 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AL354760.1-201ENST00000608357 643 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AP005431.1-201ENST00000618479 319 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AL607023.1-201ENST00000620045 248 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC015871.5-202ENST00000623252 701 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AC087821.2-201ENST00000637086 450 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC073869.10-201ENST00000642016 354 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS11Q9H270 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS11Q9H270 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
VPS11Q9H270 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
VPS11Q9H270 AC017104.4-201ENST00000636283 1592 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC000374.1-201ENST00000434698 1745 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 AC000367.1-201ENST00000452711 1766 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS11Q9H270 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS11Q9H270 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS11Q9H270 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS11Q9H270 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS11Q9H270 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS11Q9H270 AC008079.2-201ENST00000623543 20396 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS11Q9H270 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS11Q9H270 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS11Q9H270 AC006026.1-201ENST00000444025 1803 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
VPS11Q9H270 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS11Q9H270 OR52B3P-201ENST00000314715 928 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VPS11Q9H270 RN7SKP153-201ENST00000365026 316 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS11Q9H270 SNORA16A-201ENST00000384342 137 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 RNU6-348P-201ENST00000384386 107 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AL356057.2-201ENST00000403318 432 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 GAPDHP42-201ENST00000406848 981 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS11Q9H270 EEF1A1P40-201ENST00000412883 573 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AC009237.5-201ENST00000414271 501 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS11Q9H270 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS11Q9H270 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.35□□□□□ -1.55
VPS11Q9H270 AL662874.1-201ENST00000426065 230 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS11Q9H270 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS11Q9H270 EEF1A1P1-201ENST00000447052 739 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS11Q9H270 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS11Q9H270 RPS4XP12-201ENST00000461747 709 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AC011476.1-201ENST00000466725 307 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AC011979.1-201ENST00000472300 483 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 235 ms