Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AL022578.1-201ENST00000439330 1433 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 GDI2P1-201ENST00000429312 1336 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 Y_RNA.89-201ENST00000363031 102 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 RNU6-1090P-201ENST00000364065 94 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 OR52E6-202ENST00000379946 954 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 RPS3AP2-201ENST00000407190 754 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 RPS3AP3-201ENST00000411933 242 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AL139128.1-201ENST00000413921 941 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AC016769.2-201ENST00000414815 475 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 NUP35P2-201ENST00000416748 943 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 RPL21P111-201ENST00000418453 477 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AC083875.1-201ENST00000419509 405 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 NIPA2P1-201ENST00000426223 976 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AC126120.1-201ENST00000431082 470 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 PGBD4P3-201ENST00000440731 581 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 RPS26P39-201ENST00000469206 341 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AP000797.2-201ENST00000475768 606 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 RN7SL629P-201ENST00000489622 285 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AL136038.1-201ENST00000497246 351 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 RNF138P1-201ENST00000502765 546 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 HMGB1P29-201ENST00000505659 499 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AC108064.1-201ENST00000513791 460 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AC027309.2-201ENST00000520566 192 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AP000648.1-201ENST00000529682 397 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 OR5AP1P-201ENST00000529730 940 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 MIR4660-201ENST00000583549 74 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AC112191.3-201ENST00000604371 277 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AC090607.5-201ENST00000615692 224 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 uc_338.7-201ENST00000621834 124 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 AC145207.9-201ENST00000623802 325 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXP3Q9BZS1 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 MIR375-201ENST00000362103 64 ntBASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 Y_RNA.295-201ENST00000364918 102 ntBASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 Y_RNA.509-201ENST00000384506 99 ntBASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 SNORA48.4-201ENST00000391089 134 ntBASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 AL450338.1-201ENST00000407987 512 ntBASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 RN7SKP29-201ENST00000410957 272 ntBASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 RNU2-22P-201ENST00000411266 212 ntBASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 FCF1P2-201ENST00000415284 583 ntBASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 NPM1P22-201ENST00000427761 952 ntBASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 BX890604.2-201ENST00000427883 474 ntBASIC5.78□□□□□ -1.48
FOXP3Q9BZS1 AL121776.1-201ENST00000429337 372 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms