Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 CR383656.14-201ENST00000551951 406 ntBASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 CBX3P5-201ENST00000552017 521 ntBASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 AGGF1P6-201ENST00000569213 976 ntBASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 DPRXP5-201ENST00000604662 539 ntBASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 AC026741.1-201ENST00000605892 482 ntBASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 AL023583.1-201ENST00000607518 1143 ntBASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.81□□□□□ -1.48
CHMP4AQ9BY43 ZNF37BP-203ENST00000452306 1352 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 RNU6-468P-201ENST00000384003 109 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 RPS12P10-201ENST00000427031 377 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 AC005002.1-201ENST00000447458 540 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 Z99714.1-201ENST00000450463 807 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 NDUFB4P9-201ENST00000511646 388 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 AC119751.1-201ENST00000513357 765 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 AC092593.2-201ENST00000513866 913 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 AC068790.4-201ENST00000602474 263 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 RPL26P30-202ENST00000602923 645 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 AC090948.1-201ENST00000607464 549 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 AC084824.5-201ENST00000612009 413 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 AC008759.3-201ENST00000613300 508 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 Xist_exon1.1-201ENST00000618930 85 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 AL590396.4-201ENST00000636779 956 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 OTUD4P1-201ENST00000237841 3067 ntBASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.8□□□□□ -1.48
CHMP4AQ9BY43 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 RNU6-335P-201ENST00000364563 113 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 MIR3065-201ENST00000390137 79 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 HMGB3P19-201ENST00000403971 560 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 CYP4F29P-201ENST00000420685 446 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AL512637.2-201ENST00000431287 1256 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 ELOCP18-201ENST00000434209 337 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 TDGF1P1-201ENST00000445734 527 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 RPL23AP43-201ENST00000446445 471 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 SEPT14P24-201ENST00000447236 180 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AC004022.1-201ENST00000447766 1066 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 OR51B8P-201ENST00000449892 769 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AL445433.1-201ENST00000457507 257 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AC091959.2-201ENST00000477363 321 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 RN7SL812P-201ENST00000493791 279 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AC134698.5-201ENST00000519444 336 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 C1GALT1P3-201ENST00000522049 819 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AP001207.1-201ENST00000524051 481 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AC008745.1-201ENST00000604064 271 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AL513477.2-201ENST00000607858 568 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AC006023.2-201ENST00000609916 167 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 AC112200.1-201ENST00000625015 234 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 MIR4278-201ENST00000636094 69 ntBASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.79□□□□□ -1.48
CHMP4AQ9BY43 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.78□□□□□ -1.48
CHMP4AQ9BY43 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHMP4AQ9BY43 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHMP4AQ9BY43 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CHMP4AQ9BY43 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.78□□□□□ -1.48
CHMP4AQ9BY43 AC066616.2-201ENST00000559334 1481 ntBASIC5.78□□□□□ -1.48
CHMP4AQ9BY43 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHMP4AQ9BY43 RNA5SP447-201ENST00000363749 119 ntBASIC5.78□□□□□ -1.48
CHMP4AQ9BY43 RNU1-130P-201ENST00000363930 160 ntBASIC5.78□□□□□ -1.48
CHMP4AQ9BY43 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms