Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AC007685.1-201ENST00000329806 452 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 RNU6-283P-201ENST00000364788 107 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 RPL7P60-201ENST00000397636 735 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 RN7SKP202-201ENST00000410439 330 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 OR4F13P-201ENST00000428478 931 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AL117339.2-201ENST00000430475 180 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 XKRYP6-201ENST00000440468 1116 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 XKRYP3-201ENST00000442113 1116 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AC239809.1-201ENST00000450470 217 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AC098824.1-201ENST00000453565 980 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 snoU13.22-201ENST00000459428 104 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 NARSP2-201ENST00000518524 679 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AC022695.1-201ENST00000522089 237 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AC007991.1-201ENST00000522680 631 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AC008489.1-201ENST00000524271 483 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AC092747.2-201ENST00000545069 983 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 MIR3908-201ENST00000579798 126 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 MIR3158-1-201ENST00000583596 81 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AL592436.1-201ENST00000605135 558 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 GMCL1P2-201ENST00000605230 823 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 SNORA35B-201ENST00000607417 129 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AC099676.1-201ENST00000608886 657 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 OR5T3-201ENST00000303059 1023 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 RNA5SP283-201ENST00000365604 119 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 RN7SKP56-201ENST00000410513 331 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 USP9YP19-201ENST00000412165 485 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AC002075.2-201ENST00000425207 252 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 RSL24D1P8-201ENST00000434442 492 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 RPS26P40-201ENST00000435209 294 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 MTND3P4-201ENST00000453537 303 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 RPL7L1P8-201ENST00000469911 741 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AC106872.2-201ENST00000494303 480 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 IGKV2D-23-201ENST00000518179 286 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AC087272.1-201ENST00000523624 533 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 FAM106CP-201ENST00000582212 507 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AL451086.1-201ENST00000605596 223 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AC096586.2-201ENST00000610260 441 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AL354696.1-201ENST00000614652 497 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AC003001.2-201ENST00000616294 831 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AC006133.1-201ENST00000617106 264 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AL139089.1-201ENST00000620372 975 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AL118508.4-201ENST00000624142 1176 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 AL139811.1-201ENST00000424779 2299 ntBASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RSPO3Q9BXY4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.85
RSPO3Q9BXY4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
RSPO3Q9BXY4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.46□□□□□ -1.86
RSPO3Q9BXY4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms