Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.78□□□□□ -1.48
IFT140Q96RY7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.78□□□□□ -1.48
IFT140Q96RY7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
IFT140Q96RY7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
IFT140Q96RY7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
IFT140Q96RY7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
IFT140Q96RY7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
IFT140Q96RY7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
IFT140Q96RY7 RNU1-18P-201ENST00000363062 164 ntBASIC5.77□□□□□ -1.49
IFT140Q96RY7 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
IFT140Q96RY7 AC005002.1-201ENST00000447458 540 ntBASIC5.77□□□□□ -1.49
IFT140Q96RY7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.77□□□□□ -1.49
IFT140Q96RY7 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.77□□□□□ -1.49
IFT140Q96RY7 CCDC75P1-201ENST00000469247 791 ntBASIC5.77□□□□□ -1.49
IFT140Q96RY7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.77□□□□□ -1.49
IFT140Q96RY7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.77□□□□□ -1.49
IFT140Q96RY7 AC093524.1-201ENST00000564266 1094 ntBASIC5.77□□□□□ -1.49
IFT140Q96RY7 AC128687.2-201ENST00000609657 566 ntBASIC5.77□□□□□ -1.49
IFT140Q96RY7 AL359757.2-201ENST00000624309 274 ntBASIC5.77□□□□□ -1.49
IFT140Q96RY7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
IFT140Q96RY7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
IFT140Q96RY7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
IFT140Q96RY7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC5.77□□□□□ -1.49
IFT140Q96RY7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
IFT140Q96RY7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
IFT140Q96RY7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
IFT140Q96RY7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.77□□□□□ -1.49
IFT140Q96RY7 HLFP1-201ENST00000402375 499 ntBASIC5.77□□□□□ -1.49
IFT140Q96RY7 AL138885.1-201ENST00000405921 675 ntBASIC5.77□□□□□ -1.49
IFT140Q96RY7 RNA5SP306-201ENST00000411087 107 ntBASIC5.77□□□□□ -1.49
IFT140Q96RY7 AL353678.1-201ENST00000422735 741 ntBASIC5.77□□□□□ -1.49
IFT140Q96RY7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.77□□□□□ -1.49
IFT140Q96RY7 FTH1P11-201ENST00000517577 551 ntBASIC5.77□□□□□ -1.49
IFT140Q96RY7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.77□□□□□ -1.49
IFT140Q96RY7 AC007998.5-201ENST00000622938 237 ntBASIC5.77□□□□□ -1.49
IFT140Q96RY7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
IFT140Q96RY7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
IFT140Q96RY7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
IFT140Q96RY7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
IFT140Q96RY7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
IFT140Q96RY7 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
IFT140Q96RY7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
IFT140Q96RY7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
IFT140Q96RY7 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
IFT140Q96RY7 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.76□□□□□ -1.49
IFT140Q96RY7 OOSP1P1-201ENST00000423265 274 ntBASIC5.76□□□□□ -1.49
IFT140Q96RY7 BX119904.1-201ENST00000432026 348 ntBASIC5.76□□□□□ -1.49
IFT140Q96RY7 RPL7P38-201ENST00000488396 739 ntBASIC5.76□□□□□ -1.49
IFT140Q96RY7 BTG4P1-201ENST00000510421 183 ntBASIC5.76□□□□□ -1.49
IFT140Q96RY7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
IFT140Q96RY7 AC135001.1-201ENST00000544546 283 ntBASIC5.76□□□□□ -1.49
IFT140Q96RY7 AC015802.5-201ENST00000607478 399 ntBASIC5.76□□□□□ -1.49
IFT140Q96RY7 ATP5A1P2-202ENST00000616464 443 ntBASIC5.76□□□□□ -1.49
IFT140Q96RY7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
IFT140Q96RY7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.75□□□□□ -1.49
IFT140Q96RY7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
IFT140Q96RY7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
IFT140Q96RY7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.75□□□□□ -1.49
IFT140Q96RY7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.75□□□□□ -1.49
IFT140Q96RY7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
IFT140Q96RY7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
IFT140Q96RY7 RNU6-729P-201ENST00000384399 107 ntBASIC5.75□□□□□ -1.49
IFT140Q96RY7 U3.39-201ENST00000408569 239 ntBASIC5.75□□□□□ -1.49
IFT140Q96RY7 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.75□□□□□ -1.49
IFT140Q96RY7 AL353705.1-201ENST00000433468 480 ntBASIC5.75□□□□□ -1.49
IFT140Q96RY7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.75□□□□□ -1.49
IFT140Q96RY7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.75□□□□□ -1.49
IFT140Q96RY7 AC005008.1-201ENST00000456151 612 ntBASIC5.75□□□□□ -1.49
IFT140Q96RY7 OR2A20P-203ENST00000498397 1268 ntBASIC5.75□□□□□ -1.49
IFT140Q96RY7 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.75□□□□□ -1.49
IFT140Q96RY7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
IFT140Q96RY7 IGHV3-29-201ENST00000604817 344 ntBASIC5.75□□□□□ -1.49
IFT140Q96RY7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.75□□□□□ -1.49
IFT140Q96RY7 SAGE2P-201ENST00000420011 2126 ntBASIC5.75□□□□□ -1.49
IFT140Q96RY7 DDX6P1-205ENST00000441966 1436 ntBASIC5.75□□□□□ -1.49
IFT140Q96RY7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
IFT140Q96RY7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
IFT140Q96RY7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
IFT140Q96RY7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
IFT140Q96RY7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
IFT140Q96RY7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
IFT140Q96RY7 RNA5SP197-201ENST00000363357 119 ntBASIC5.74□□□□□ -1.49
IFT140Q96RY7 RN7SL594P-201ENST00000470590 287 ntBASIC5.74□□□□□ -1.49
IFT140Q96RY7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.74□□□□□ -1.49
IFT140Q96RY7 TRBV12-2-201ENST00000489763 344 ntBASIC5.74□□□□□ -1.49
IFT140Q96RY7 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.74□□□□□ -1.49
IFT140Q96RY7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.74□□□□□ -1.49
IFT140Q96RY7 AL121766.1-201ENST00000547436 487 ntBASIC5.74□□□□□ -1.49
IFT140Q96RY7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.74□□□□□ -1.49
IFT140Q96RY7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.74□□□□□ -1.49
IFT140Q96RY7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
IFT140Q96RY7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
IFT140Q96RY7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.74□□□□□ -1.49
IFT140Q96RY7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
IFT140Q96RY7 HSPA8P19-201ENST00000505359 1517 ntBASIC5.74□□□□□ -1.49
IFT140Q96RY7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.74□□□□□ -1.49
IFT140Q96RY7 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.74□□□□□ -1.49
IFT140Q96RY7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
IFT140Q96RY7 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
IFT140Q96RY7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms