Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX18Q96RF0 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX18Q96RF0 AL592182.3-201ENST00000642132 3304 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX18Q96RF0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX18Q96RF0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX18Q96RF0 Y_RNA.18-201ENST00000362461 102 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 RNA5SP335-201ENST00000363817 110 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 RNA5SP223-201ENST00000365174 120 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 SNORD116-23-201ENST00000384645 92 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 RNU1-77P-201ENST00000390868 162 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX18Q96RF0 SPTLC1P2-201ENST00000407089 121 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 AL139098.1-201ENST00000407291 389 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 AL663109.1-201ENST00000411498 844 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 PIGPP2-201ENST00000411569 458 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 DPPA2P3-201ENST00000411853 655 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 RPL7L1P9-201ENST00000431298 745 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 CYCSP12-201ENST00000437729 300 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 COX6CP2-201ENST00000444980 225 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 RPL23AP35-201ENST00000451906 501 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 RN7SL610P-201ENST00000463845 291 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 RPL7AP10-201ENST00000481016 791 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC090686.1-201ENST00000481577 749 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC109486.1-201ENST00000486833 374 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC004069.2-201ENST00000505438 1114 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC006499.3-201ENST00000506077 748 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 RNA5SP92-201ENST00000516437 110 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX18Q96RF0 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC073648.5-201ENST00000603502 305 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC091488.1-201ENST00000604239 660 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 AL512329.2-201ENST00000607350 548 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC016769.4-201ENST00000616893 535 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC118658.2-201ENST00000618697 459 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 AP001005.3-201ENST00000622049 129 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 AC018445.2-201ENST00000622987 260 ntBASIC4.69□□□□□ -1.66
SNX18Q96RF0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX18Q96RF0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX18Q96RF0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.69□□□□□ -1.66
SNX18Q96RF0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX18Q96RF0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC027514.1-201ENST00000588561 1603 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNX18Q96RF0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 MTND4P34-201ENST00000572715 1371 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 SALL4P2-201ENST00000423288 2910 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX18Q96RF0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNX18Q96RF0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX18Q96RF0 PABPC1P6-201ENST00000445594 1829 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 RNU6-492P-201ENST00000363035 104 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNX18Q96RF0 SNORA70-201ENST00000384436 135 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 OR8V1P-201ENST00000395193 873 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNX18Q96RF0 RN7SKP16-201ENST00000410180 299 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 RNA5SP146-201ENST00000410743 123 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 BOLA3P4-201ENST00000418151 400 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 Z99497.1-201ENST00000421282 135 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AL513175.1-201ENST00000431492 780 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 RPS24P1-201ENST00000438550 371 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 RPL36AP33-201ENST00000450395 310 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms