Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC42Q96M95 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC42Q96M95 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC42Q96M95 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC42Q96M95 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC42Q96M95 U3.39-201ENST00000408569 239 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 MTND4P22-201ENST00000413116 1169 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 AL591419.1-201ENST00000427423 339 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 AL117339.2-201ENST00000430475 180 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC42Q96M95 AC245517.2-201ENST00000442890 346 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC42Q96M95 VN1R96P-201ENST00000446052 858 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 AC114755.5-201ENST00000447760 831 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 MRPS31P2-201ENST00000451581 518 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 AL049830.2-201ENST00000480072 201 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 TPT1P3-201ENST00000492841 512 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC42Q96M95 AC108064.1-201ENST00000513791 460 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 RNU6-347P-201ENST00000516658 105 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
CCDC42Q96M95 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC42Q96M95 AP006245.1-201ENST00000522549 120 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC42Q96M95 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC42Q96M95 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC42Q96M95 MIR4716-201ENST00000579628 84 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC42Q96M95 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC42Q96M95 MIR6830-201ENST00000636015 70 ntBASIC3.88□□□□□ -1.79
CCDC42Q96M95 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC42Q96M95 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC42Q96M95 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC42Q96M95 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC42Q96M95 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC42Q96M95 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC42Q96M95 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC42Q96M95 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC42Q96M95 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CCDC42Q96M95 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CCDC42Q96M95 SPRR2C-201ENST00000290702 219 ntBASIC3.87□□□□□ -1.79
CCDC42Q96M95 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCDC42Q96M95 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC42Q96M95 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC42Q96M95 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC42Q96M95 AC068533.1-201ENST00000418542 415 ntBASIC3.87□□□□□ -1.79
CCDC42Q96M95 COX6CP17-201ENST00000421389 185 ntBASIC3.87□□□□□ -1.79
CCDC42Q96M95 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC42Q96M95 AC069277.2-201ENST00000454211 432 ntBASIC3.87□□□□□ -1.79
CCDC42Q96M95 CEACAMP4-201ENST00000457676 421 ntBASIC3.87□□□□□ -1.79
CCDC42Q96M95 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCDC42Q96M95 AC020893.1-201ENST00000502452 580 ntBASIC3.87□□□□□ -1.79
CCDC42Q96M95 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC42Q96M95 HAUS1P1-201ENST00000505275 832 ntBASIC3.87□□□□□ -1.79
CCDC42Q96M95 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC42Q96M95 SMARCE1P4-201ENST00000523647 241 ntBASIC3.87□□□□□ -1.79
CCDC42Q96M95 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC42Q96M95 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC42Q96M95 AC083899.3-201ENST00000603413 594 ntBASIC3.87□□□□□ -1.79
CCDC42Q96M95 AC034236.3-201ENST00000605999 461 ntBASIC3.87□□□□□ -1.79
CCDC42Q96M95 AC005344.1-201ENST00000613391 459 ntBASIC3.87□□□□□ -1.79
CCDC42Q96M95 AC009318.3-201ENST00000616916 503 ntBASIC3.87□□□□□ -1.79
CCDC42Q96M95 AC010435.1-201ENST00000623353 1177 ntBASIC3.87□□□□□ -1.79
CCDC42Q96M95 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC42Q96M95 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC42Q96M95 AP004289.2-201ENST00000444413 1457 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 MIR372-201ENST00000362225 67 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 RNU6-225P-201ENST00000384613 103 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 MIR30B-201ENST00000384850 88 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC42Q96M95 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC42Q96M95 RPL17P36-201ENST00000420302 549 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 SDCBPP2-201ENST00000424643 885 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 HMGB1P32-201ENST00000425971 565 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 YY1P1-201ENST00000427625 668 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 ARF4P2-201ENST00000430209 526 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC42Q96M95 HMGB3P8-201ENST00000449709 577 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 RN7SL330P-201ENST00000469709 307 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 AC010460.1-201ENST00000507087 466 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC42Q96M95 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC42Q96M95 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC42Q96M95 NDUFB9P3-201ENST00000521269 501 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC42Q96M95 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC42Q96M95 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC42Q96M95 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC42Q96M95 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 RNU1-30P-201ENST00000606575 163 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC42Q96M95 AC012531.5-201ENST00000611375 151 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 AC008121.2-201ENST00000614647 523 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 AC022149.2-201ENST00000621061 203 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 C2orf27A-204ENST00000623058 969 ntBASIC3.86□□□□□ -1.79
CCDC42Q96M95 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CCDC42Q96M95 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC42Q96M95 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCDC42Q96M95 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC42Q96M95 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms