Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5□□□□□ -1.61
USP47Q96K76 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP47Q96K76 CR382285.2-201ENST00000624662 1495 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP47Q96K76 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.99□□□□□ -1.61
USP47Q96K76 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP47Q96K76 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP47Q96K76 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.99□□□□□ -1.61
USP47Q96K76 EIF4A1P11-201ENST00000451239 222 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 RBMY2UP-201ENST00000453474 324 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.99□□□□□ -1.61
USP47Q96K76 AC005229.2-201ENST00000456995 399 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 AP002371.1-201ENST00000463604 433 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 AC010307.1-201ENST00000467206 836 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 HMGB3P14-201ENST00000494195 599 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 NARSP2-201ENST00000518524 679 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 OR5B10P-201ENST00000532869 642 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.99□□□□□ -1.61
USP47Q96K76 AC107016.1-201ENST00000550463 337 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.99□□□□□ -1.61
USP47Q96K76 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.99□□□□□ -1.61
USP47Q96K76 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.99□□□□□ -1.61
USP47Q96K76 AC234775.3-201ENST00000564612 656 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.99□□□□□ -1.61
USP47Q96K76 AC243654.2-201ENST00000612843 443 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 AL158062.1-201ENST00000619632 745 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 AC243312.2-201ENST00000623340 601 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 AP003355.3-201ENST00000623465 114 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 CDC27P2-201ENST00000425026 1922 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 AL049781.1-201ENST00000623195 3585 ntBASIC4.99□□□□□ -1.61
USP47Q96K76 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
USP47Q96K76 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
USP47Q96K76 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
USP47Q96K76 AL365440.1-201ENST00000436135 2167 ntBASIC4.98□□□□□ -1.61
USP47Q96K76 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.98□□□□□ -1.61
USP47Q96K76 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP47Q96K76 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.98□□□□□ -1.61
USP47Q96K76 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.98□□□□□ -1.61
USP47Q96K76 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.98□□□□□ -1.61
USP47Q96K76 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
USP47Q96K76 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP47Q96K76 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
USP47Q96K76 Y_RNA.111-201ENST00000363248 100 ntBASIC4.98□□□□□ -1.61
USP47Q96K76 RPL21P110-201ENST00000433345 446 ntBASIC4.98□□□□□ -1.61
USP47Q96K76 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.98□□□□□ -1.61
USP47Q96K76 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.98□□□□□ -1.61
USP47Q96K76 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP47Q96K76 AC008155.2-201ENST00000464337 397 ntBASIC4.98□□□□□ -1.61
USP47Q96K76 RN7SL594P-201ENST00000470590 287 ntBASIC4.98□□□□□ -1.61
USP47Q96K76 AC016550.3-201ENST00000515706 767 ntBASIC4.98□□□□□ -1.61
USP47Q96K76 SNORA70.17-201ENST00000516449 133 ntBASIC4.98□□□□□ -1.61
USP47Q96K76 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.98□□□□□ -1.61
USP47Q96K76 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.98□□□□□ -1.61
USP47Q96K76 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.98□□□□□ -1.61
USP47Q96K76 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.98□□□□□ -1.61
USP47Q96K76 AC010591.1-201ENST00000603941 649 ntBASIC4.98□□□□□ -1.61
USP47Q96K76 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.98□□□□□ -1.61
USP47Q96K76 AC022960.2-201ENST00000616300 666 ntBASIC4.98□□□□□ -1.61
USP47Q96K76 MIR3651-201ENST00000630427 90 ntBASIC4.98□□□□□ -1.61
USP47Q96K76 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP47Q96K76 AC006504.1-201ENST00000562493 3666 ntBASIC4.98□□□□□ -1.61
USP47Q96K76 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP47Q96K76 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP47Q96K76 NAMPTP1-201ENST00000440465 2514 ntBASIC4.97□□□□□ -1.61
USP47Q96K76 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
USP47Q96K76 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.97□□□□□ -1.61
USP47Q96K76 RN7SKP56-201ENST00000410513 331 ntBASIC4.97□□□□□ -1.61
USP47Q96K76 MTND4LP21-201ENST00000415303 295 ntBASIC4.97□□□□□ -1.61
USP47Q96K76 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.97□□□□□ -1.61
USP47Q96K76 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.97□□□□□ -1.61
USP47Q96K76 AC092641.1-201ENST00000440229 772 ntBASIC4.97□□□□□ -1.61
USP47Q96K76 ANP32BP2-201ENST00000454525 545 ntBASIC4.97□□□□□ -1.61
USP47Q96K76 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.97□□□□□ -1.61
USP47Q96K76 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.97□□□□□ -1.61
USP47Q96K76 SETP14-201ENST00000497538 873 ntBASIC4.97□□□□□ -1.61
USP47Q96K76 HSPD1P15-201ENST00000505573 1122 ntBASIC4.97□□□□□ -1.61
USP47Q96K76 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.97□□□□□ -1.61
USP47Q96K76 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.97□□□□□ -1.61
USP47Q96K76 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.97□□□□□ -1.61
USP47Q96K76 AC103843.2-201ENST00000530523 682 ntBASIC4.97□□□□□ -1.61
USP47Q96K76 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.97□□□□□ -1.61
USP47Q96K76 AC007458.1-201ENST00000542812 373 ntBASIC4.97□□□□□ -1.61
USP47Q96K76 AL390334.1-201ENST00000556395 450 ntBASIC4.97□□□□□ -1.61
USP47Q96K76 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.97□□□□□ -1.61
USP47Q96K76 AC006116.10-201ENST00000591836 581 ntBASIC4.97□□□□□ -1.61
USP47Q96K76 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.97□□□□□ -1.61
USP47Q96K76 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.97□□□□□ -1.61
USP47Q96K76 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
USP47Q96K76 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP47Q96K76 AL356274.2-201ENST00000624379 3752 ntBASIC4.97□□□□□ -1.61
USP47Q96K76 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.96□□□□□ -1.61
USP47Q96K76 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
USP47Q96K76 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP47Q96K76 FRG1CP-201ENST00000358464 769 ntBASIC4.96□□□□□ -1.62
USP47Q96K76 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP47Q96K76 RNA5SP267-201ENST00000364893 126 ntBASIC4.96□□□□□ -1.62
USP47Q96K76 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
USP47Q96K76 MTND4P22-201ENST00000413116 1169 ntBASIC4.96□□□□□ -1.62
USP47Q96K76 AC234781.4-201ENST00000419384 244 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms