Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.1□□□□□ -1.75
PTP4A1Q93096 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PTP4A1Q93096 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTP4A1Q93096 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PTP4A1Q93096 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.1□□□□□ -1.75
PTP4A1Q93096 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTP4A1Q93096 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTP4A1Q93096 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AL592148.3-201ENST00000608771 2646 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTP4A1Q93096 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 RNU1-130P-201ENST00000363930 160 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 RNU6-353P-201ENST00000364266 108 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 RNU6-619P-201ENST00000365146 108 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTP4A1Q93096 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 RN7SKP100-201ENST00000411258 284 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AL590762.4-201ENST00000425885 253 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC104837.2-201ENST00000427236 424 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC114973.1-201ENST00000429057 632 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 IFNNP1-201ENST00000429219 553 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 PPIAP17-201ENST00000438507 471 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 RPL7P59-201ENST00000447700 943 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 NCOR1P1-202ENST00000486162 291 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC146944.2-203ENST00000502493 354 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC139495.1-202ENST00000513164 354 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 RN7SKP276-201ENST00000516242 268 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 IGLV3-26-201ENST00000520756 302 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 OR4C2P-201ENST00000530855 1064 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 AP001880.2-201ENST00000538233 448 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 MIR4737-201ENST00000583979 81 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC007687.1-201ENST00000602704 304 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 AL512782.1-201ENST00000603093 364 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC113368.1-201ENST00000603736 382 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 DPRXP5-201ENST00000604662 539 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 AL354760.1-201ENST00000608357 643 ntBASIC4.09□□□□□ -1.75
PTP4A1Q93096 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PTP4A1Q93096 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTP4A1Q93096 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTP4A1Q93096 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PTP4A1Q93096 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PTP4A1Q93096 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
PTP4A1Q93096 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.09□□□□□ -1.76
PTP4A1Q93096 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
PTP4A1Q93096 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
PTP4A1Q93096 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.08□□□□□ -1.76
PTP4A1Q93096 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PTP4A1Q93096 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTP4A1Q93096 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.08□□□□□ -1.76
PTP4A1Q93096 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTP4A1Q93096 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PTP4A1Q93096 RNA5SP191-201ENST00000362585 102 ntBASIC4.08□□□□□ -1.76
PTP4A1Q93096 RNU6-115P-201ENST00000364310 107 ntBASIC4.08□□□□□ -1.76
PTP4A1Q93096 SNORA7.2-201ENST00000364446 145 ntBASIC4.08□□□□□ -1.76
PTP4A1Q93096 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTP4A1Q93096 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PTP4A1Q93096 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTP4A1Q93096 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTP4A1Q93096 RN7SKP267-201ENST00000410381 285 ntBASIC4.08□□□□□ -1.76
PTP4A1Q93096 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.08□□□□□ -1.76
PTP4A1Q93096 AC244098.2-201ENST00000422068 99 ntBASIC4.08□□□□□ -1.76
PTP4A1Q93096 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.08□□□□□ -1.76
PTP4A1Q93096 MTCYBP15-201ENST00000433123 1127 ntBASIC4.08□□□□□ -1.76
PTP4A1Q93096 AC008072.1-201ENST00000434254 824 ntBASIC4.08□□□□□ -1.76
PTP4A1Q93096 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTP4A1Q93096 RPL7P28-201ENST00000437739 740 ntBASIC4.08□□□□□ -1.76
PTP4A1Q93096 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.08□□□□□ -1.76
PTP4A1Q93096 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.08□□□□□ -1.76
PTP4A1Q93096 AC000041.1-201ENST00000439655 175 ntBASIC4.08□□□□□ -1.76
PTP4A1Q93096 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms