Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RPS26P39-201ENST00000469206 341 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 AC074386.1-201ENST00000476560 767 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.66□□□□□ -1.5
ERCC4Q92889 GTF2F2P1-201ENST00000511083 675 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.66□□□□□ -1.5
ERCC4Q92889 RNA5SP135-201ENST00000517019 125 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.66□□□□□ -1.5
ERCC4Q92889 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.66□□□□□ -1.5
ERCC4Q92889 AC012339.2-201ENST00000523996 453 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.66□□□□□ -1.5
ERCC4Q92889 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.66□□□□□ -1.5
ERCC4Q92889 PCNPP1-201ENST00000552501 511 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.66□□□□□ -1.5
ERCC4Q92889 NDUFB4P11-201ENST00000560510 395 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.66□□□□□ -1.5
ERCC4Q92889 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.66□□□□□ -1.5
ERCC4Q92889 MIR4489-201ENST00000578869 62 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 MIR4801-201ENST00000582704 82 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.66□□□□□ -1.5
ERCC4Q92889 AC022146.1-201ENST00000595307 847 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 AC128687.1-201ENST00000605304 619 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 AL031775.1-201ENST00000607014 887 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 AC092794.1-201ENST00000612734 582 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 AC025594.3-201ENST00000613068 790 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 AL512624.1-201ENST00000613638 469 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 AC015914.2-201ENST00000618167 288 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 AC015871.5-202ENST00000623252 701 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.66□□□□□ -1.5
ERCC4Q92889 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.66□□□□□ -1.5
ERCC4Q92889 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ERCC4Q92889 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ERCC4Q92889 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
ERCC4Q92889 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ERCC4Q92889 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ERCC4Q92889 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ERCC4Q92889 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.66□□□□□ -1.5
ERCC4Q92889 OR51H2P-202ENST00000641424 3046 ntBASIC5.66□□□□□ -1.5
ERCC4Q92889 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.66□□□□□ -1.5
ERCC4Q92889 RARSP1-201ENST00000542842 1418 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC4Q92889 RNF6P1-201ENST00000444889 1784 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.65□□□□□ -1.5
ERCC4Q92889 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC4Q92889 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ERCC4Q92889 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.65□□□□□ -1.5
ERCC4Q92889 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.65□□□□□ -1.5
ERCC4Q92889 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC4Q92889 SNORA4.1-201ENST00000364263 144 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ERCC4Q92889 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC4Q92889 UBBP2-201ENST00000376781 231 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 SNORA70.10-201ENST00000384515 134 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 Y_RNA.517-201ENST00000384551 106 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC4Q92889 RN7SKP125-201ENST00000410481 302 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.65□□□□□ -1.5
ERCC4Q92889 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.65□□□□□ -1.5
ERCC4Q92889 MTND1P4-201ENST00000435196 415 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 RPS25P9-201ENST00000435591 252 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 AC241584.1-201ENST00000438469 1241 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 AL137845.2-201ENST00000444292 988 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.65□□□□□ -1.5
ERCC4Q92889 AL034418.1-201ENST00000448675 860 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.65□□□□□ -1.5
ERCC4Q92889 MTCO3P11-201ENST00000455103 774 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 HMGB1P4-201ENST00000455362 567 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.65□□□□□ -1.5
ERCC4Q92889 RPS17P2-201ENST00000461663 408 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.65□□□□□ -1.5
ERCC4Q92889 RN7SL177P-201ENST00000476596 299 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 RPL7P16-201ENST00000479738 738 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 AL161747.1-201ENST00000480068 358 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 AC090686.1-201ENST00000481577 749 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.65□□□□□ -1.5
ERCC4Q92889 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.65□□□□□ -1.5
ERCC4Q92889 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.65□□□□□ -1.5
ERCC4Q92889 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.65□□□□□ -1.5
ERCC4Q92889 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.65□□□□□ -1.5
ERCC4Q92889 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.65□□□□□ -1.5
ERCC4Q92889 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.65□□□□□ -1.5
ERCC4Q92889 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.65□□□□□ -1.5
ERCC4Q92889 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 AC087683.1-201ENST00000591187 441 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 FKBP1AP1-201ENST00000594588 318 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 AC239868.4-201ENST00000608318 671 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 AL391497.1-201ENST00000608671 547 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ERCC4Q92889 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 AC023509.5-201ENST00000617434 807 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 AL356121.2-201ENST00000624715 780 ntBASIC5.65□□□□□ -1.5
ERCC4Q92889 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.65□□□□□ -1.5
ERCC4Q92889 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.65□□□□□ -1.5
ERCC4Q92889 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.65□□□□□ -1.51
ERCC4Q92889 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ERCC4Q92889 DDX18P4-201ENST00000511690 1966 ntBASIC5.65□□□□□ -1.51
ERCC4Q92889 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
ERCC4Q92889 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.65□□□□□ -1.51
ERCC4Q92889 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
ERCC4Q92889 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ERCC4Q92889 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms