Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC140172.1-201ENST00000502928 141 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 ARL4AP1-201ENST00000503220 705 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 MTATP6P22-201ENST00000507369 598 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC109471.1-201ENST00000511631 612 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 RN7SKP283-201ENST00000517197 270 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC008562.1-201ENST00000521763 330 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 HIGD1AP10-201ENST00000527837 282 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC022832.1-201ENST00000530718 645 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC015912.2-201ENST00000571053 181 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC011260.1-201ENST00000578420 472 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 RSL24D1P11-201ENST00000591045 491 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AL390816.3-201ENST00000604527 1066 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 COX6CP4-201ENST00000605798 228 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AL451049.1-201ENST00000608672 497 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC108751.5-201ENST00000492880 1336 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AL353743.4-201ENST00000422653 1547 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 MTND4P34-201ENST00000572715 1371 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AL022322.2-201ENST00000624072 20397 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 RNU6-500P-201ENST00000362349 107 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 RNU1-82P-201ENST00000390851 165 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 RNU6-192P-201ENST00000391253 100 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 CEACAMP8-201ENST00000413902 580 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 OR2AM1P-201ENST00000422137 422 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC074386.1-201ENST00000476560 767 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC010424.1-201ENST00000506336 297 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 ATP1B1P1-201ENST00000509767 915 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC092851.1-201ENST00000535964 478 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC007225.2-201ENST00000562529 256 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC012435.1-202ENST00000568772 240 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 RN7SL802P-201ENST00000577858 299 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC068790.6-201ENST00000602558 258 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 SNORD91B-202ENST00000608459 222 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC103591.3-201ENST00000608684 209 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC007497.1-201ENST00000610421 561 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC005962.2-201ENST00000611427 652 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC124312.6-202ENST00000623624 418 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 CDRT1-208ENST00000630868 794 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC084035.1-201ENST00000634543 607 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC096656.1-201ENST00000623826 1364 ntBASIC4.91□□□□□ -1.62
ATG4AQ8WYN0 AC083843.2-201ENST00000568248 6253 ntBASIC4.9□□□□□ -1.62
ATG4AQ8WYN0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ATG4AQ8WYN0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
ATG4AQ8WYN0 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ATG4AQ8WYN0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.9□□□□□ -1.62
ATG4AQ8WYN0 DBF4P1-201ENST00000412976 1892 ntBASIC4.9□□□□□ -1.62
ATG4AQ8WYN0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
ATG4AQ8WYN0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ATG4AQ8WYN0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.9□□□□□ -1.62
ATG4AQ8WYN0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ATG4AQ8WYN0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.9□□□□□ -1.62
ATG4AQ8WYN0 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 RN7SKP95-201ENST00000362860 303 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 Y_RNA.559-201ENST00000384686 107 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 RPL23AP47-201ENST00000408017 460 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms