Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SLC44A1Q8WWI5 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
SLC44A1Q8WWI5 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
SLC44A1Q8WWI5 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 RNA5SP443-201ENST00000363083 132 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 SNORD74.4-201ENST00000364129 80 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 SNORD66.1-201ENST00000391230 76 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AL513175.2-201ENST00000422071 443 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 C1DP1-201ENST00000426049 402 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC084290.1-201ENST00000434995 374 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC069285.2-201ENST00000440210 275 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AL353748.1-201ENST00000440753 474 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 BX248409.1-201ENST00000455497 255 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 RPS29P22-201ENST00000472363 168 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC069528.1-202ENST00000482888 637 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC021146.5-201ENST00000503544 545 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC010285.3-201ENST00000511668 676 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 snoZ278.1-201ENST00000517059 112 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 UBE2FP2-201ENST00000566646 462 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC087683.2-201ENST00000611384 326 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC015726.3-201ENST00000624501 418 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC046144.1-201ENST00000478559 1853 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC138393.1-206ENST00000540997 1886 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC090017.1-201ENST00000548612 1779 ntBASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A1Q8WWI5 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 RNU4-28P-201ENST00000364739 141 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 SNORD116-12-201ENST00000384468 92 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 RNU6-603P-201ENST00000411403 107 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 RPL22P18-201ENST00000417197 377 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 Z75741.2-201ENST00000417272 1167 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 MTCO2P21-201ENST00000419780 677 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC073069.1-201ENST00000428657 441 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AL031663.1-201ENST00000437445 219 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 CEACAMP9-201ENST00000442990 513 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 RPS26P30-201ENST00000443431 335 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC112492.1-201ENST00000449607 712 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 RPS29P33-201ENST00000456717 146 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 APOOP2-201ENST00000461561 539 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 IGJP1-201ENST00000522682 475 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC090281.1-201ENST00000523019 276 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 LRRC34P1-201ENST00000542742 915 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 CR383656.6-201ENST00000550518 394 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AL352979.3-201ENST00000553515 247 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC018552.3-201ENST00000567416 561 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC091042.1-201ENST00000579213 173 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 MIR4666A-201ENST00000580160 79 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 MIR4270-201ENST00000581799 70 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AL139395.1-201ENST00000603662 160 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC002487.1-201ENST00000604565 994 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC116447.1-201ENST00000613153 453 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms