Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL353597.2-202ENST00000434901 373 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 MTND3P1-201ENST00000441336 220 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 OR6K5P-201ENST00000447050 945 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AC104978.1-201ENST00000449387 391 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AL162591.2-201ENST00000449634 317 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 ENPP7P11-201ENST00000505915 627 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AC025674.1-201ENST00000507074 324 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 OR5H4P-201ENST00000510851 923 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 Y_RNA.719-201ENST00000517156 106 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AP001781.1-201ENST00000530977 207 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AC007834.2-201ENST00000536310 343 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 KPNA2P3-201ENST00000584190 848 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AC020910.2-201ENST00000603635 610 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AL360219.1-201ENST00000610230 366 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AC067852.7-201ENST00000623270 535 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AL512506.2-201ENST00000624472 458 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC017079.1-201ENST00000333650 415 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 RNU5D-1-201ENST00000363299 116 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 RNU6-115P-201ENST00000364310 107 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 RN7SKP227-201ENST00000364445 330 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 RNA5SP479-201ENST00000364858 117 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 SNORA71.2-201ENST00000364941 134 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 RPL23AP47-201ENST00000408017 460 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 RN7SKP267-201ENST00000410381 285 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 RNU2-42P-201ENST00000410697 113 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AL136133.1-201ENST00000413694 376 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 FCF1P2-201ENST00000415284 583 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 LUZP4P1-201ENST00000415420 344 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC140479.3-201ENST00000418944 1126 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 RPL17P36-201ENST00000420302 549 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AL645608.4-201ENST00000423619 154 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 IPMKP1-201ENST00000425988 855 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 SKP1P3-201ENST00000429280 487 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC092162.1-201ENST00000432828 434 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC010881.1-201ENST00000433830 235 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 NPM1P33-201ENST00000438918 872 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 TCEA1P3-201ENST00000443005 880 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 OR52E3P-201ENST00000452083 936 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 ART2BP-201ENST00000453501 499 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC079168.2-201ENST00000453977 416 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 PPIAP21-201ENST00000464473 501 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC010307.1-201ENST00000467206 836 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 ACTG1P13-201ENST00000486987 1043 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 RPS3AP22-201ENST00000488297 769 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC016559.2-201ENST00000510759 359 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC109445.1-201ENST00000512356 383 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 RNU6-709P-201ENST00000517257 104 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 SMARCE1P4-201ENST00000523647 241 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 LSM3P2-201ENST00000551246 273 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC116553.2-201ENST00000564203 463 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC093249.4-201ENST00000564755 259 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC093519.1-201ENST00000566109 298 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC023575.1-201ENST00000580510 358 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC069304.3-201ENST00000603938 1084 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AL158042.1-201ENST00000605338 460 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC005962.2-201ENST00000611427 652 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms