Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 AL034374.1-201ENST00000406329 351 ntBASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 OR4F13P-201ENST00000428478 931 ntBASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 AC009263.1-201ENST00000441193 1239 ntBASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 NOTCH2P1-201ENST00000443481 624 ntBASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 AL359073.1-201ENST00000448036 403 ntBASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 MTCO3P16-201ENST00000454456 754 ntBASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 MTCO3P20-201ENST00000454926 688 ntBASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 UBDP1-202ENST00000457888 382 ntBASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 RPL7P15-201ENST00000461190 712 ntBASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 AC022034.3-201ENST00000471393 478 ntBASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 LARP7P4-201ENST00000481075 878 ntBASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 UBE2CP3-201ENST00000502715 450 ntBASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 AC108471.1-201ENST00000513977 287 ntBASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 RNU1-30P-201ENST00000606575 163 ntBASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC12Q8WUD4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 CR381670.1-201ENST00000624291 1693 ntBASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 MIR554-201ENST00000384874 96 ntBASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 HSPE1P8-201ENST00000406997 288 ntBASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 HMGB3P20-201ENST00000417997 600 ntBASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 RPL36AP36-201ENST00000418616 301 ntBASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 AC073464.3-201ENST00000422564 712 ntBASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 AL645939.1-201ENST00000453429 797 ntBASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 AC020898.1-201ENST00000474167 787 ntBASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 AC010680.3-201ENST00000604215 520 ntBASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 AC112230.1-201ENST00000604342 547 ntBASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 MTND4P10-201ENST00000446199 1363 ntBASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 AC134882.1-201ENST00000603738 1676 ntBASIC4.26□□□□□ -1.73
CCDC12Q8WUD4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 RPS4XP5-202ENST00000449995 1334 ntBASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 Z98941.1-201ENST00000407764 100 ntBASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AL035246.1-201ENST00000433554 1255 ntBASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AC010655.1-201ENST00000449336 292 ntBASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AP001960.1-201ENST00000506494 658 ntBASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AC093311.1-201ENST00000506586 2021 ntBASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AC027281.1-201ENST00000574178 758 ntBASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 VN1R84P-201ENST00000593697 235 ntBASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AC145207.9-201ENST00000623802 325 ntBASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 CFTRP2-201ENST00000634304 199 ntBASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC12Q8WUD4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms