Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AC008759.1-201ENST00000589783 983 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AC015802.5-201ENST00000607478 399 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AC027287.1-201ENST00000553115 1453 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 FTH1P24-201ENST00000503502 462 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 SMG1P4-204ENST00000523028 4131 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AC092868.3-201ENST00000560515 784 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AC073136.2-201ENST00000417282 849 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AC245054.1-201ENST00000420944 258 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AL160175.1-201ENST00000428124 247 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 MAPRE1P3-201ENST00000435438 796 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 RNA5SP154-201ENST00000516193 111 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AF186190.1-201ENST00000517470 480 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AC073657.2-201ENST00000605661 303 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AL162274.2-201ENST00000614406 332 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 RNA5SP424-201ENST00000390988 115 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AC004924.1-201ENST00000480160 781 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AC087468.1-201ENST00000604365 630 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 MIR6715A-201ENST00000615929 79 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AC012020.1-201ENST00000624541 1728 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AL022322.2-201ENST00000624072 20397 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 RPL21P11-201ENST00000461458 483 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 KC877982.1-201ENST00000602313 470 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AC136601.2-201ENST00000604356 474 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 MTCO1P24-201ENST00000515438 1558 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AC093535.2-201ENST00000624769 2326 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 MIR449A-201ENST00000362113 91 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 SETP10-201ENST00000424368 814 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 NDUFB1P1-201ENST00000435191 180 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AL121877.1-201ENST00000453704 622 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 S100A11P2-201ENST00000467589 312 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 RNVU1-4-201ENST00000612985 164 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 ZNF90P1-201ENST00000480493 1951 ntBASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
ALMS1Q8TCU4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 DMD-211ENST00000378707 7410 ntTSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 RNA5SP502-201ENST00000362694 119 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 RPL7P38-201ENST00000488396 739 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms