Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 OR8R1P-201ENST00000543943 764 ntBASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 MIR4660-201ENST00000583549 74 ntBASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 AC010738.1-201ENST00000604970 987 ntBASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 AC097505.1-201ENST00000610199 565 ntBASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 FAM27B-201ENST00000610601 213 ntBASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 AL139418.1-201ENST00000613613 177 ntBASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 AF246928.1-201ENST00000623768 87 ntBASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 AL049536.1-201ENST00000625043 744 ntBASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 AP000526.1-201ENST00000603308 1388 ntBASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SMC1BQ8NDV3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AP001029.2-203ENST00000589795 4910 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 EI24P3-201ENST00000399046 1062 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AL021407.1-201ENST00000404531 386 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 RPL21P108-201ENST00000413857 481 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 ELOCP8-201ENST00000439309 332 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 ATP5C1P1-201ENST00000441945 895 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 ELOCP15-201ENST00000442090 332 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 FHP1-201ENST00000442741 703 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AL606662.1-201ENST00000445763 553 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 TPMTP4-201ENST00000450749 678 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AC097173.1-201ENST00000505862 819 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AC010285.3-201ENST00000511668 676 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 RNA5SP230-201ENST00000517039 122 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 RN7SKP283-201ENST00000517197 270 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AL359219.2-201ENST00000555184 348 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AC025884.1-201ENST00000556034 378 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 GTF2IP8-201ENST00000560687 584 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AC025165.5-201ENST00000602802 578 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AP004247.3-201ENST00000608682 624 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AC015712.7-201ENST00000615211 635 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 CDRT1-208ENST00000630868 794 ntBASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMC1BQ8NDV3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 AC119744.1-201ENST00000454746 1715 ntBASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 AC087359.1-201ENST00000508335 1740 ntBASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 AC109315.1-201ENST00000584143 1347 ntBASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 RNU6-839P-201ENST00000363347 108 ntBASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 RNU6-931P-201ENST00000363850 107 ntBASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 RN7SKP153-201ENST00000365026 316 ntBASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 AL161909.1-201ENST00000397390 712 ntBASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.85□□□□□ -1.47
SMC1BQ8NDV3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms