Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
SCUBE3Q8IX30 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.03□□□□□ -1.28
SCUBE3Q8IX30 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCUBE3Q8IX30 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCUBE3Q8IX30 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCUBE3Q8IX30 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.03□□□□□ -1.28
SCUBE3Q8IX30 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.03□□□□□ -1.28
SCUBE3Q8IX30 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SCUBE3Q8IX30 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
SCUBE3Q8IX30 UQCRC2P1-201ENST00000417777 1332 ntBASIC7.02□□□□□ -1.28
SCUBE3Q8IX30 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
SCUBE3Q8IX30 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
SCUBE3Q8IX30 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 Y_RNA.60-201ENST00000362831 98 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 RN7SKP250-201ENST00000363924 321 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC026310.1-201ENST00000396004 378 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 RN7SKP296-201ENST00000411185 341 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 UBE2V1P14-201ENST00000415815 558 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC079807.1-201ENST00000429993 481 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 RPL23AP74-201ENST00000437246 471 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC114495.1-201ENST00000441274 436 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AL590664.1-201ENST00000448065 339 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AL034369.1-201ENST00000453808 477 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 MED28P2-201ENST00000475771 317 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AL390198.2-201ENST00000510553 222 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC025465.3-201ENST00000510570 311 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 RNU6-475P-201ENST00000516073 104 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 IGHV3-57-201ENST00000520143 280 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 RN7SL270P-201ENST00000579643 281 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC091133.5-201ENST00000603088 301 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC092447.9-201ENST00000603395 144 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 EIF3FP1-201ENST00000613970 806 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 AC233263.6-201ENST00000631132 1963 ntBASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SCUBE3Q8IX30 WAC-209ENST00000428935 1320 ntTSL 2 BASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 AC011755.1-201ENST00000623763 2049 ntBASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 AL591848.4-201ENST00000567832 3472 ntBASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 AL359195.2-201ENST00000623657 4412 ntBASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 RNA5SP308-201ENST00000362532 115 ntBASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 Y_RNA.210-201ENST00000364161 110 ntBASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 RNA5SP140-201ENST00000364524 92 ntBASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 RNU6-200P-201ENST00000364743 107 ntBASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 Y_RNA.291-201ENST00000364886 113 ntBASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 Y_RNA.461-201ENST00000384263 103 ntBASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 EIF5P1-201ENST00000400019 1231 ntBASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 MIR1302-6-201ENST00000408466 90 ntBASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 MORN2-203ENST00000409131 544 ntTSL 5 BASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 RNU2-36P-201ENST00000410361 191 ntBASIC7.01□□□□□ -1.29
SCUBE3Q8IX30 RN7SKP205-201ENST00000410999 307 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms