Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SCN4BQ8IWT1 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.81□□□□□ -1.64
SCN4BQ8IWT1 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN4BQ8IWT1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 ASNSP1-204ENST00000641977 1664 ntBASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 SNORD116.1-201ENST00000365628 92 ntBASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 ELOCP19-201ENST00000411919 318 ntBASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 OR2AH1P-201ENST00000425717 928 ntBASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 ACTR3P2-201ENST00000439585 1257 ntBASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 MRPL48P1-201ENST00000445390 636 ntBASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 OR4A2P-201ENST00000527276 913 ntBASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 AC068993.1-201ENST00000546724 589 ntBASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 MIR3912-201ENST00000577566 105 ntBASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 AC115286.1-201ENST00000604298 434 ntBASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 TUSC7.1-201ENST00000610969 165 ntBASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 AC012409.3-201ENST00000611343 981 ntBASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 DDX18P3-201ENST00000404856 2007 ntBASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN4BQ8IWT1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AC139713.2-215ENST00000641428 5037 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AP005901.5-201ENST00000545779 1796 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AC019155.1-201ENST00000382242 574 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 ATP5F1P2-201ENST00000398143 760 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AL049545.1-201ENST00000401856 572 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AL592291.1-201ENST00000403830 352 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 RAB28P1-201ENST00000411517 641 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 OR51A3P-201ENST00000413596 924 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 SNRPFP1-201ENST00000414761 252 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AL008987.1-201ENST00000415528 237 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 RPS6P15-201ENST00000431996 751 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 GTF2IP7-202ENST00000436677 309 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 TDGF1P1-201ENST00000445734 527 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 TPT1P12-201ENST00000448968 492 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AC015724.1-201ENST00000478577 156 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 MTND2P14-201ENST00000482139 351 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AC020890.1-201ENST00000491837 504 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AC026979.1-201ENST00000492525 396 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AC093534.1-201ENST00000504977 132 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 SNORA3.4-201ENST00000515969 96 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AC009094.1-201ENST00000564443 426 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AC020634.1-201ENST00000608701 549 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AC091304.6-201ENST00000619761 202 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 AL157770.1-201ENST00000623049 439 ntBASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN4BQ8IWT1 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms