Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RPL5P30-201ENST00000465511 891 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 RPS26P28-201ENST00000470806 348 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AC083829.1-201ENST00000503756 657 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AP000827.1-201ENST00000527814 258 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AL121834.1-201ENST00000572284 509 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AP001180.3-201ENST00000582221 145 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 BPIFA4P-203ENST00000603168 689 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AC115286.1-201ENST00000604298 434 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AC002487.1-201ENST00000604565 994 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AC010680.4-201ENST00000605334 543 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AC090948.1-201ENST00000607464 549 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 FAM157B-203ENST00000639350 358 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 ZNF33CP-201ENST00000432492 2030 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 SGO1P1-201ENST00000603525 1447 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 NXPH1-205ENST00000602349 1953 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 RNA5SP509-201ENST00000364577 119 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 MIR124-3-201ENST00000384866 87 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 RNU6-1000P-201ENST00000391066 106 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 TMSB4XP8-201ENST00000402089 135 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 FCF1P5-201ENST00000406490 482 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 AC096533.1-201ENST00000411645 353 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 OR51A3P-201ENST00000413596 924 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 TMSB4XP6-201ENST00000415187 135 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 RPL7AP25-201ENST00000423357 805 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 TMSB4XP1-201ENST00000424567 135 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 RPS12P10-201ENST00000427031 377 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 MTCYBP15-201ENST00000433123 1127 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 AC011998.1-201ENST00000433403 117 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 RAB11AP1-201ENST00000442978 646 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 RPL23AP24-201ENST00000458203 385 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 RPL21P126-201ENST00000470049 478 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 MTND3P3-201ENST00000505004 126 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 AC091860.1-201ENST00000505723 432 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 NDUFB4P12-201ENST00000513465 390 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 RN7SKP234-201ENST00000517173 224 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 AC004217.3-201ENST00000551552 878 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 EIF5A2P1-201ENST00000564027 460 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 AC022069.1-201ENST00000582910 658 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 BNIP3P27-201ENST00000599991 412 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 AC012409.3-201ENST00000611343 981 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 AC009237.17-201ENST00000618111 748 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 AC138393.1-206ENST00000540997 1886 ntBASIC4.57□□□□□ -1.68
PRPF39Q86UA1 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PRPF39Q86UA1 OR51H2P-202ENST00000641424 3046 ntBASIC4.56□□□□□ -1.68
PRPF39Q86UA1 AC139769.1-204ENST00000472297 1931 ntBASIC4.56□□□□□ -1.68
PRPF39Q86UA1 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.56□□□□□ -1.68
PRPF39Q86UA1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PRPF39Q86UA1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PRPF39Q86UA1 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.56□□□□□ -1.68
PRPF39Q86UA1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRPF39Q86UA1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF39Q86UA1 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRPF39Q86UA1 MIR153-1-201ENST00000384914 90 ntBASIC4.56□□□□□ -1.68
PRPF39Q86UA1 MIR16-1-201ENST00000385271 89 ntBASIC4.56□□□□□ -1.68
PRPF39Q86UA1 MTCO2P31-201ENST00000402702 684 ntBASIC4.56□□□□□ -1.68
PRPF39Q86UA1 GSTA8P-201ENST00000404253 637 ntBASIC4.56□□□□□ -1.68
PRPF39Q86UA1 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRPF39Q86UA1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.56□□□□□ -1.68
PRPF39Q86UA1 RWDD4P2-201ENST00000426392 563 ntBASIC4.56□□□□□ -1.68
PRPF39Q86UA1 RSL24D1P6-201ENST00000426934 401 ntBASIC4.56□□□□□ -1.68
PRPF39Q86UA1 PSMA2P3-201ENST00000429685 675 ntBASIC4.56□□□□□ -1.68
PRPF39Q86UA1 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 331.5 ms