Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
CSMD3Q7Z407 FTLP6-201ENST00000355274 422 ntBASIC2.4□□□□□ -2.02
CSMD3Q7Z407 RPF2P1-201ENST00000424137 906 ntBASIC2.4□□□□□ -2.02
CSMD3Q7Z407 AL513175.1-201ENST00000431492 780 ntBASIC2.4□□□□□ -2.02
CSMD3Q7Z407 CCDC75P1-201ENST00000469247 791 ntBASIC2.4□□□□□ -2.02
CSMD3Q7Z407 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.4□□□□□ -2.02
CSMD3Q7Z407 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.4□□□□□ -2.02
CSMD3Q7Z407 AC106734.1-201ENST00000568646 663 ntBASIC2.4□□□□□ -2.02
CSMD3Q7Z407 KLKP1-201ENST00000595979 403 ntBASIC2.4□□□□□ -2.02
CSMD3Q7Z407 AP003392.5-201ENST00000607857 415 ntBASIC2.4□□□□□ -2.02
CSMD3Q7Z407 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 EEF1A1P41-201ENST00000414667 207 ntBASIC2.4□□□□□ -2.03
CSMD3Q7Z407 AL691447.1-201ENST00000419456 387 ntBASIC2.4□□□□□ -2.03
CSMD3Q7Z407 RN7SKP132-201ENST00000516001 208 ntBASIC2.4□□□□□ -2.03
CSMD3Q7Z407 Y_RNA.676-201ENST00000516393 96 ntBASIC2.4□□□□□ -2.03
CSMD3Q7Z407 AC023161.2-201ENST00000551218 780 ntBASIC2.4□□□□□ -2.03
CSMD3Q7Z407 MIR4319-201ENST00000577285 85 ntBASIC2.4□□□□□ -2.03
CSMD3Q7Z407 AL133247.2-201ENST00000603236 482 ntBASIC2.4□□□□□ -2.03
CSMD3Q7Z407 5S_rRNA.16-201ENST00000612928 119 ntBASIC2.4□□□□□ -2.03
CSMD3Q7Z407 AC069209.1-201ENST00000619282 651 ntBASIC2.4□□□□□ -2.03
CSMD3Q7Z407 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 AC062016.1-201ENST00000355719 319 ntBASIC2.4□□□□□ -2.03
CSMD3Q7Z407 RNA5SP197-201ENST00000363357 119 ntBASIC2.4□□□□□ -2.03
CSMD3Q7Z407 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 HIGD1AP3-201ENST00000515857 278 ntBASIC2.4□□□□□ -2.03
CSMD3Q7Z407 AC027281.1-201ENST00000574178 758 ntBASIC2.4□□□□□ -2.03
CSMD3Q7Z407 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.4□□□□□ -2.03
CSMD3Q7Z407 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AC104058.1-201ENST00000448028 297 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AC006480.1-201ENST00000449887 378 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AP000916.1-201ENST00000533869 835 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AC105227.2-201ENST00000615075 605 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 TNPO1P3-201ENST00000436471 2662 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AL645568.2-201ENST00000432815 1337 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 U3.23-201ENST00000391132 200 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 OR1AA1P-201ENST00000419597 916 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AC003685.2-201ENST00000422795 395 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 DYNLL1P7-201ENST00000429273 258 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 SLC31A1P1-201ENST00000451221 567 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AC109925.1-201ENST00000478069 331 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AC090877.1-201ENST00000561418 344 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AC063979.1-201ENST00000415539 377 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 FTH1P1-201ENST00000437933 532 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 DDX6P1-205ENST00000441966 1436 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 BX276092.4-201ENST00000452056 248 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AC109458.1-201ENST00000508858 316 ntBASIC2.39□□□□□ -2.03
CSMD3Q7Z407 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC2.39□□□□□ -2.03
CSMD3Q7Z407 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 BCORP1-203ENST00000513194 5093 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 UBE3AP2-201ENST00000429033 2259 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AC083843.3-201ENST00000623679 2186 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 RSL24D1P1-201ENST00000404972 493 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 MIR1261-201ENST00000408659 82 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AC005008.1-201ENST00000456151 612 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 DEFB109F-201ENST00000491870 277 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 BTG4P1-201ENST00000510421 183 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms