Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHFQ7M4L6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHFQ7M4L6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC016716.1-201ENST00000265882 708 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHFQ7M4L6 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 RNU6-621P-201ENST00000364752 109 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHFQ7M4L6 SUGT1P1-201ENST00000379514 476 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHFQ7M4L6 RNU5A-2P-201ENST00000384337 116 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AL590084.2-201ENST00000401481 382 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AL391361.1-201ENST00000405580 489 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 RPL23AP47-201ENST00000408017 460 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 MIR1302-8-201ENST00000408342 128 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 BOLA3P4-201ENST00000418151 400 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC098592.1-201ENST00000419352 333 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 RPS12P5-201ENST00000423449 371 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 MTND4P20-201ENST00000424125 869 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 USP9YP4-201ENST00000424401 1745 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC009965.2-201ENST00000425328 970 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 SKP1P3-201ENST00000429280 487 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 UBE2V1P1-201ENST00000430836 445 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AL050321.1-201ENST00000432363 400 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AL354941.1-201ENST00000438600 464 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 MTCYBP34-201ENST00000439552 670 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 CNOT7P2-201ENST00000441051 832 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AL606662.1-201ENST00000445763 553 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 SLC25A18P1-201ENST00000449385 454 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AL591363.1-201ENST00000450091 483 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 RPL12P26-201ENST00000452430 487 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 RN7SL101P-201ENST00000496350 279 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 RPF2P2-201ENST00000504693 896 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 HIGD1AP14-201ENST00000507617 282 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC106872.4-201ENST00000510050 523 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 RNU6-202P-201ENST00000515998 96 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 MYL12AP1-201ENST00000518490 515 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHFQ7M4L6 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 ATP5J2P6-201ENST00000565203 266 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC209154.1-201ENST00000582156 337 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 MIR4999-201ENST00000585029 91 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC040904.1-201ENST00000590850 223 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC009220.3-201ENST00000604318 586 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC009163.6-201ENST00000612367 342 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 EIF3FP1-201ENST00000613970 806 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC079248.2-201ENST00000623779 326 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 MIR4302-201ENST00000638058 60 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC099654.2-201ENST00000433031 1980 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHFQ7M4L6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC005539.1-201ENST00000443768 1479 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHFQ7M4L6 AL513185.3-201ENST00000433335 1300 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 ZFRP1-201ENST00000457579 2970 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHFQ7M4L6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHFQ7M4L6 RNU1-20P-201ENST00000363314 162 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 RNA5SP435-201ENST00000364044 108 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHFQ7M4L6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHFQ7M4L6 SNORD116-1-201ENST00000384335 95 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 RNU2-50P-201ENST00000410494 143 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 RN7SKP206-201ENST00000410823 293 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms