Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 HSPE1P11-201ENST00000339579 310 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 Y_RNA.193-201ENST00000363979 102 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 RNU6-641P-201ENST00000384006 107 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AL121834.1-202ENST00000404494 277 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 RPS4XP9-201ENST00000405151 780 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 RNA5SP345-201ENST00000410646 108 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 RN7SKP213-201ENST00000410746 298 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 MTND4LP17-201ENST00000414607 293 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AL359092.1-201ENST00000417156 265 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AL139148.1-201ENST00000427122 680 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 BX323845.3-201ENST00000428215 527 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 CBX3P6-201ENST00000430257 527 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AC108734.1-201ENST00000439549 399 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 RPL7AP6-201ENST00000477943 801 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AL049874.2-201ENST00000492636 288 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 SLC25A15P5-201ENST00000508033 253 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 MTCYBP40-201ENST00000509390 1135 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AC098591.2-201ENST00000510152 315 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 RNU6-1088P-201ENST00000516850 104 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 RANP9-201ENST00000519957 271 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AP003115.1-201ENST00000569849 463 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 RN7SL208P-201ENST00000577964 296 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AL669831.4-202ENST00000590817 238 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AL355816.1-201ENST00000607951 118 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AL031666.3-201ENST00000609320 1006 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AL121612.2-201ENST00000612261 482 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AC083806.3-201ENST00000614016 455 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 U4.1-201ENST00000620349 87 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 AC022418.1-201ENST00000624118 445 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 FLJ42393-201ENST00000623801 2270 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 UG0898H09-202ENST00000623646 7040 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 Y_RNA.22-201ENST00000362492 102 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 Y_RNA.149-201ENST00000363558 117 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 MIR558-201ENST00000384920 94 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 RNU2-29P-201ENST00000410423 189 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 RN7SKP158-201ENST00000410453 326 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AL139396.1-201ENST00000421137 167 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AC091390.2-201ENST00000432573 374 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AC006466.1-201ENST00000438721 289 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 TXNP1-201ENST00000441872 371 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AL359955.2-201ENST00000445380 353 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 IGKV1OR-3-201ENST00000446944 348 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AC092436.1-201ENST00000506450 503 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AP000889.2-201ENST00000532684 490 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AC024224.1-201ENST00000538284 609 ntBASIC7.01□□□□□ -1.29
PRPF38BQ5VTL8 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms