Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 RNA5SP42-201ENST00000364278 115 ntBASIC4.39□□□□□ -1.71
RFX7Q2KHR2 OR6K3-202ENST00000368146 996 ntBASIC4.39□□□□□ -1.71
RFX7Q2KHR2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 HSPD1P16-201ENST00000402302 394 ntBASIC4.39□□□□□ -1.71
RFX7Q2KHR2 U3.39-201ENST00000408569 239 ntBASIC4.39□□□□□ -1.71
RFX7Q2KHR2 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 KRR1P1-201ENST00000419430 803 ntBASIC4.39□□□□□ -1.71
RFX7Q2KHR2 OSTCP5-201ENST00000425293 453 ntBASIC4.39□□□□□ -1.71
RFX7Q2KHR2 AC006989.1-201ENST00000427212 131 ntBASIC4.39□□□□□ -1.71
RFX7Q2KHR2 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 AL121877.1-201ENST00000453704 622 ntBASIC4.39□□□□□ -1.71
RFX7Q2KHR2 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 SNORA70.18-201ENST00000516696 98 ntBASIC4.39□□□□□ -1.71
RFX7Q2KHR2 AL121766.1-201ENST00000547436 487 ntBASIC4.39□□□□□ -1.71
RFX7Q2KHR2 AC023161.2-201ENST00000551218 780 ntBASIC4.39□□□□□ -1.71
RFX7Q2KHR2 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.39□□□□□ -1.71
RFX7Q2KHR2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 RNVU1-14-201ENST00000384770 164 ntBASIC4.38□□□□□ -1.71
RFX7Q2KHR2 RNU2-65P-201ENST00000410162 185 ntBASIC4.38□□□□□ -1.71
RFX7Q2KHR2 AC096644.3-201ENST00000416788 338 ntBASIC4.38□□□□□ -1.71
RFX7Q2KHR2 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 HMGB3P14-201ENST00000494195 599 ntBASIC4.38□□□□□ -1.71
RFX7Q2KHR2 AC026427.2-201ENST00000506228 536 ntBASIC4.38□□□□□ -1.71
RFX7Q2KHR2 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 AL121576.1-201ENST00000556055 276 ntBASIC4.38□□□□□ -1.71
RFX7Q2KHR2 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.38□□□□□ -1.71
RFX7Q2KHR2 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.38□□□□□ -1.71
RFX7Q2KHR2 AC027287.1-201ENST00000553115 1453 ntBASIC4.38□□□□□ -1.71
RFX7Q2KHR2 AC245100.2-201ENST00000454544 1679 ntBASIC4.38□□□□□ -1.71
RFX7Q2KHR2 MFSD8-236ENST00000641509 4050 ntBASIC4.38□□□□□ -1.71
RFX7Q2KHR2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 MTCO1P12-201ENST00000414273 1543 ntBASIC4.37□□□□□ -1.71
RFX7Q2KHR2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 RNA5SP502-201ENST00000362694 119 ntBASIC4.37□□□□□ -1.71
RFX7Q2KHR2 RNU1-33P-201ENST00000364249 162 ntBASIC4.37□□□□□ -1.71
RFX7Q2KHR2 RNA5SP72-201ENST00000364442 117 ntBASIC4.37□□□□□ -1.71
RFX7Q2KHR2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 IPMKP1-201ENST00000425988 855 ntBASIC4.37□□□□□ -1.71
RFX7Q2KHR2 RPL21P110-201ENST00000433345 446 ntBASIC4.37□□□□□ -1.71
RFX7Q2KHR2 AL357520.1-201ENST00000441557 453 ntBASIC4.37□□□□□ -1.71
RFX7Q2KHR2 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 MTCO3P16-201ENST00000454456 754 ntBASIC4.37□□□□□ -1.71
RFX7Q2KHR2 FGF7P3-201ENST00000454645 303 ntBASIC4.37□□□□□ -1.71
RFX7Q2KHR2 AC074250.1-201ENST00000511117 192 ntBASIC4.37□□□□□ -1.71
RFX7Q2KHR2 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 DEFB109D-201ENST00000529497 240 ntBASIC4.37□□□□□ -1.71
RFX7Q2KHR2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.37□□□□□ -1.71
RFX7Q2KHR2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFX7Q2KHR2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RFX7Q2KHR2 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
RFX7Q2KHR2 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFX7Q2KHR2 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFX7Q2KHR2 RNU6-178P-201ENST00000384631 104 ntBASIC4.36□□□□□ -1.71
RFX7Q2KHR2 AC007068.1-201ENST00000396690 844 ntBASIC4.36□□□□□ -1.71
RFX7Q2KHR2 RPS7P15-201ENST00000415804 584 ntBASIC4.36□□□□□ -1.71
RFX7Q2KHR2 DBIP2-201ENST00000419076 262 ntBASIC4.36□□□□□ -1.71
RFX7Q2KHR2 AC245054.1-201ENST00000420944 258 ntBASIC4.36□□□□□ -1.71
RFX7Q2KHR2 AC002075.2-201ENST00000425207 252 ntBASIC4.36□□□□□ -1.71
RFX7Q2KHR2 RPS26P47-201ENST00000427219 348 ntBASIC4.36□□□□□ -1.71
RFX7Q2KHR2 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.36□□□□□ -1.71
RFX7Q2KHR2 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.36□□□□□ -1.71
RFX7Q2KHR2 AC133473.1-201ENST00000455173 299 ntBASIC4.36□□□□□ -1.71
RFX7Q2KHR2 AC099560.2-201ENST00000457554 255 ntBASIC4.36□□□□□ -1.71
RFX7Q2KHR2 RPS4XP10-201ENST00000465034 731 ntBASIC4.36□□□□□ -1.71
RFX7Q2KHR2 RPL23AP73-201ENST00000492507 471 ntBASIC4.36□□□□□ -1.71
RFX7Q2KHR2 AL358832.1-201ENST00000497800 389 ntBASIC4.36□□□□□ -1.71
RFX7Q2KHR2 SNORA70.17-201ENST00000516449 133 ntBASIC4.36□□□□□ -1.71
RFX7Q2KHR2 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.36□□□□□ -1.71
RFX7Q2KHR2 AC037471.2-201ENST00000564941 598 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms