Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.39□□□□□ -1.87
USF2Q15853 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.39□□□□□ -1.87
USF2Q15853 CR383656.6-201ENST00000550518 394 ntBASIC3.39□□□□□ -1.87
USF2Q15853 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.39□□□□□ -1.87
USF2Q15853 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.39□□□□□ -1.87
USF2Q15853 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USF2Q15853 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.39□□□□□ -1.87
USF2Q15853 AC025175.1-201ENST00000606482 759 ntBASIC3.39□□□□□ -1.87
USF2Q15853 AC005156.1-201ENST00000613371 573 ntBASIC3.39□□□□□ -1.87
USF2Q15853 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.39□□□□□ -1.87
USF2Q15853 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.39□□□□□ -1.87
USF2Q15853 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
USF2Q15853 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
USF2Q15853 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.39□□□□□ -1.87
USF2Q15853 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.39□□□□□ -1.87
USF2Q15853 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.39□□□□□ -1.87
USF2Q15853 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USF2Q15853 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
USF2Q15853 AC092326.2-201ENST00000624772 1561 ntBASIC3.38□□□□□ -1.87
USF2Q15853 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USF2Q15853 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
USF2Q15853 SNORA70F-201ENST00000384142 135 ntBASIC3.38□□□□□ -1.87
USF2Q15853 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.38□□□□□ -1.87
USF2Q15853 MTCO3P4-201ENST00000419236 787 ntBASIC3.38□□□□□ -1.87
USF2Q15853 TCEA1P2-201ENST00000420496 906 ntBASIC3.38□□□□□ -1.87
USF2Q15853 UQCRBP1-201ENST00000421129 336 ntBASIC3.38□□□□□ -1.87
USF2Q15853 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.38□□□□□ -1.87
USF2Q15853 AC005517.2-201ENST00000424673 553 ntBASIC3.38□□□□□ -1.87
USF2Q15853 ABCF2P2-201ENST00000450549 296 ntBASIC3.38□□□□□ -1.87
USF2Q15853 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.38□□□□□ -1.87
USF2Q15853 RPL23AP14-201ENST00000468281 468 ntBASIC3.38□□□□□ -1.87
USF2Q15853 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USF2Q15853 AC007686.1-201ENST00000488511 463 ntBASIC3.38□□□□□ -1.87
USF2Q15853 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.38□□□□□ -1.87
USF2Q15853 AC025459.1-201ENST00000504072 156 ntBASIC3.38□□□□□ -1.87
USF2Q15853 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.38□□□□□ -1.87
USF2Q15853 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.38□□□□□ -1.87
USF2Q15853 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.38□□□□□ -1.87
USF2Q15853 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.38□□□□□ -1.87
USF2Q15853 AC010342.1-201ENST00000514047 877 ntBASIC3.38□□□□□ -1.87
USF2Q15853 AC104997.1-201ENST00000519761 717 ntBASIC3.38□□□□□ -1.87
USF2Q15853 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USF2Q15853 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.38□□□□□ -1.87
USF2Q15853 MIR4270-201ENST00000581799 70 ntBASIC3.38□□□□□ -1.87
USF2Q15853 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.38□□□□□ -1.87
USF2Q15853 MIR432-201ENST00000606207 94 ntBASIC3.38□□□□□ -1.87
USF2Q15853 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.38□□□□□ -1.87
USF2Q15853 HSPA8P19-201ENST00000505359 1517 ntBASIC3.38□□□□□ -1.87
USF2Q15853 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.38□□□□□ -1.87
USF2Q15853 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.38□□□□□ -1.87
USF2Q15853 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USF2Q15853 AC026951.1-201ENST00000559530 2459 ntBASIC3.37□□□□□ -1.87
USF2Q15853 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.37□□□□□ -1.87
USF2Q15853 AC090337.1-201ENST00000579651 2074 ntBASIC3.37□□□□□ -1.87
USF2Q15853 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USF2Q15853 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USF2Q15853 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
USF2Q15853 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USF2Q15853 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.37□□□□□ -1.87
USF2Q15853 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USF2Q15853 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
USF2Q15853 RNA5SP443-201ENST00000363083 132 ntBASIC3.37□□□□□ -1.87
USF2Q15853 SNORD113.2-201ENST00000364166 89 ntBASIC3.37□□□□□ -1.87
USF2Q15853 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
USF2Q15853 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USF2Q15853 RPS4XP9-201ENST00000405151 780 ntBASIC3.37□□□□□ -1.87
USF2Q15853 AIMP1P1-201ENST00000418670 937 ntBASIC3.37□□□□□ -1.87
USF2Q15853 RPL7AP25-201ENST00000423357 805 ntBASIC3.37□□□□□ -1.87
USF2Q15853 RPL21P66-201ENST00000426566 466 ntBASIC3.37□□□□□ -1.87
USF2Q15853 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.37□□□□□ -1.87
USF2Q15853 FO393419.3-201ENST00000428741 282 ntBASIC3.37□□□□□ -1.87
USF2Q15853 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.37□□□□□ -1.87
USF2Q15853 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.37□□□□□ -1.87
USF2Q15853 FTH1P16-201ENST00000435241 552 ntBASIC3.37□□□□□ -1.87
USF2Q15853 RPL7P29-201ENST00000437151 728 ntBASIC3.37□□□□□ -1.87
USF2Q15853 AC114495.1-201ENST00000441274 436 ntBASIC3.37□□□□□ -1.87
USF2Q15853 Z77249.1-201ENST00000444622 1175 ntBASIC3.37□□□□□ -1.87
USF2Q15853 RPL6P5-201ENST00000445678 828 ntBASIC3.37□□□□□ -1.87
USF2Q15853 AL162591.2-201ENST00000449634 317 ntBASIC3.37□□□□□ -1.87
USF2Q15853 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.37□□□□□ -1.87
USF2Q15853 RN7SL354P-201ENST00000469282 294 ntBASIC3.37□□□□□ -1.87
USF2Q15853 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
USF2Q15853 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.37□□□□□ -1.87
USF2Q15853 RNU6-1073P-201ENST00000517182 106 ntBASIC3.37□□□□□ -1.87
USF2Q15853 RNU6-1231P-201ENST00000517185 103 ntBASIC3.37□□□□□ -1.87
USF2Q15853 RN7SKP283-201ENST00000517197 270 ntBASIC3.37□□□□□ -1.87
USF2Q15853 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.37□□□□□ -1.87
USF2Q15853 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.37□□□□□ -1.87
USF2Q15853 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.37□□□□□ -1.87
USF2Q15853 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.37□□□□□ -1.87
USF2Q15853 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.37□□□□□ -1.87
USF2Q15853 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USF2Q15853 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.37□□□□□ -1.87
USF2Q15853 AC069061.3-201ENST00000582254 823 ntBASIC3.37□□□□□ -1.87
USF2Q15853 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
USF2Q15853 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.37□□□□□ -1.87
USF2Q15853 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.37□□□□□ -1.87
USF2Q15853 AC092653.1-201ENST00000608509 531 ntBASIC3.37□□□□□ -1.87
USF2Q15853 AC006023.2-201ENST00000609916 167 ntBASIC3.37□□□□□ -1.87
USF2Q15853 U73479.1-201ENST00000618062 168 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms