Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC027281.1-201ENST00000574178 758 ntBASIC4.7□□□□□ -1.66
COL16A1Q07092 MIR3908-201ENST00000579798 126 ntBASIC4.7□□□□□ -1.66
COL16A1Q07092 AL732618.1-201ENST00000623251 301 ntBASIC4.7□□□□□ -1.66
COL16A1Q07092 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
COL16A1Q07092 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL16A1Q07092 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
COL16A1Q07092 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL16A1Q07092 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL16A1Q07092 RNA5SP235-201ENST00000365411 114 ntBASIC4.69□□□□□ -1.66
COL16A1Q07092 SNORA54-201ENST00000384281 123 ntBASIC4.69□□□□□ -1.66
COL16A1Q07092 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.69□□□□□ -1.66
COL16A1Q07092 AL353678.1-201ENST00000422735 741 ntBASIC4.69□□□□□ -1.66
COL16A1Q07092 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.69□□□□□ -1.66
COL16A1Q07092 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.69□□□□□ -1.66
COL16A1Q07092 AC026801.2-201ENST00000515352 425 ntBASIC4.69□□□□□ -1.66
COL16A1Q07092 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.69□□□□□ -1.66
COL16A1Q07092 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL16A1Q07092 RNVU1-4-201ENST00000612985 164 ntBASIC4.69□□□□□ -1.66
COL16A1Q07092 MIR7154-201ENST00000620673 73 ntBASIC4.69□□□□□ -1.66
COL16A1Q07092 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.69□□□□□ -1.66
COL16A1Q07092 OR5AC4P-202ENST00000642086 985 ntBASIC4.69□□□□□ -1.66
COL16A1Q07092 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL16A1Q07092 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
COL16A1Q07092 AC008079.2-201ENST00000623543 20396 ntBASIC4.69□□□□□ -1.66
COL16A1Q07092 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL16A1Q07092 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.69□□□□□ -1.66
COL16A1Q07092 OR5H2-201ENST00000355273 945 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COL16A1Q07092 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.68□□□□□ -1.66
COL16A1Q07092 AL121578.1-201ENST00000428051 892 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.68□□□□□ -1.66
COL16A1Q07092 ARL4AP3-201ENST00000441452 574 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.68□□□□□ -1.66
COL16A1Q07092 RNU6-237P-201ENST00000515985 71 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 AC022080.3-201ENST00000544433 482 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 DDX6P1-205ENST00000441966 1436 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.68□□□□□ -1.66
COL16A1Q07092 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL16A1Q07092 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
COL16A1Q07092 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
COL16A1Q07092 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL16A1Q07092 AC003985.2-201ENST00000562268 1669 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COL16A1Q07092 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL16A1Q07092 NPM1P25-201ENST00000429734 854 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 NDUFB1P1-201ENST00000435191 180 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 NPM1P48-201ENST00000436002 853 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 HLA-N-201ENST00000437516 135 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.68□□□□□ -1.66
COL16A1Q07092 AL356535.1-201ENST00000440335 398 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.68□□□□□ -1.66
COL16A1Q07092 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 VN1R104P-201ENST00000505115 1009 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL16A1Q07092 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.68□□□□□ -1.66
COL16A1Q07092 AL163642.2-201ENST00000604722 1019 ntBASIC4.68□□□□□ -1.66
COL16A1Q07092 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.68□□□□□ -1.66
COL16A1Q07092 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.67□□□□□ -1.66
COL16A1Q07092 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL16A1Q07092 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.67□□□□□ -1.66
COL16A1Q07092 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL16A1Q07092 AC007390.2-201ENST00000606229 3803 ntBASIC4.67□□□□□ -1.66
COL16A1Q07092 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL16A1Q07092 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL16A1Q07092 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
COL16A1Q07092 AC062016.1-201ENST00000355719 319 ntBASIC4.67□□□□□ -1.66
COL16A1Q07092 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL16A1Q07092 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.67□□□□□ -1.66
COL16A1Q07092 AL353705.1-201ENST00000433468 480 ntBASIC4.67□□□□□ -1.66
COL16A1Q07092 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.67□□□□□ -1.66
COL16A1Q07092 EIF5A2P1-201ENST00000564027 460 ntBASIC4.67□□□□□ -1.66
COL16A1Q07092 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.67□□□□□ -1.66
COL16A1Q07092 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.67□□□□□ -1.66
COL16A1Q07092 OR2AS2P-201ENST00000606902 342 ntBASIC4.67□□□□□ -1.66
COL16A1Q07092 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL16A1Q07092 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL16A1Q07092 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.66□□□□□ -1.66
COL16A1Q07092 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.66□□□□□ -1.66
COL16A1Q07092 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
COL16A1Q07092 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL16A1Q07092 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
COL16A1Q07092 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.66□□□□□ -1.66
COL16A1Q07092 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.66□□□□□ -1.66
COL16A1Q07092 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.66□□□□□ -1.66
COL16A1Q07092 AL359693.1-201ENST00000614959 2407 ntBASIC4.66□□□□□ -1.66
COL16A1Q07092 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL16A1Q07092 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL16A1Q07092 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL16A1Q07092 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.66□□□□□ -1.66
COL16A1Q07092 RNU6-233P-201ENST00000410845 141 ntBASIC4.66□□□□□ -1.66
COL16A1Q07092 HIGD1AP12-201ENST00000427832 281 ntBASIC4.66□□□□□ -1.66
COL16A1Q07092 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.66□□□□□ -1.66
COL16A1Q07092 AL139132.1-201ENST00000431587 344 ntBASIC4.66□□□□□ -1.66
COL16A1Q07092 AC017037.1-201ENST00000508460 471 ntBASIC4.66□□□□□ -1.66
COL16A1Q07092 AC109458.1-201ENST00000508858 316 ntBASIC4.66□□□□□ -1.66
COL16A1Q07092 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.66□□□□□ -1.66
COL16A1Q07092 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL16A1Q07092 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.66□□□□□ -1.66
COL16A1Q07092 AC092868.3-201ENST00000560515 784 ntBASIC4.66□□□□□ -1.66
COL16A1Q07092 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms