Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 MRPL49P2-201ENST00000521066 465 ntBASIC2.89□□□□□ -1.95
SSBP1Q04837 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC2.89□□□□□ -1.95
SSBP1Q04837 OR4C2P-201ENST00000530855 1064 ntBASIC2.89□□□□□ -1.95
SSBP1Q04837 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.89□□□□□ -1.95
SSBP1Q04837 AC055876.1-202ENST00000567053 138 ntBASIC2.89□□□□□ -1.95
SSBP1Q04837 MIR4277-201ENST00000578298 84 ntBASIC2.89□□□□□ -1.95
SSBP1Q04837 AC087499.8-201ENST00000578406 226 ntBASIC2.89□□□□□ -1.95
SSBP1Q04837 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC2.89□□□□□ -1.95
SSBP1Q04837 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSBP1Q04837 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSBP1Q04837 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSBP1Q04837 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSBP1Q04837 FP236240.3-201ENST00000623061 327 ntBASIC2.89□□□□□ -1.95
SSBP1Q04837 AC004972.1-201ENST00000623934 2209 ntBASIC2.89□□□□□ -1.95
SSBP1Q04837 AL356274.2-201ENST00000624379 3752 ntBASIC2.89□□□□□ -1.95
SSBP1Q04837 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SSBP1Q04837 AC009951.1-201ENST00000623674 2614 ntBASIC2.89□□□□□ -1.95
SSBP1Q04837 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSBP1Q04837 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.88□□□□□ -1.95
SSBP1Q04837 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.88□□□□□ -1.95
SSBP1Q04837 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSBP1Q04837 SNORA11.5-201ENST00000408163 128 ntBASIC2.88□□□□□ -1.95
SSBP1Q04837 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.88□□□□□ -1.95
SSBP1Q04837 AC069218.2-201ENST00000411665 344 ntBASIC2.88□□□□□ -1.95
SSBP1Q04837 Z99755.1-201ENST00000414048 380 ntBASIC2.88□□□□□ -1.95
SSBP1Q04837 CST9LP2-201ENST00000437612 320 ntBASIC2.88□□□□□ -1.95
SSBP1Q04837 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC2.88□□□□□ -1.95
SSBP1Q04837 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SSBP1Q04837 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.88□□□□□ -1.95
SSBP1Q04837 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.88□□□□□ -1.95
SSBP1Q04837 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.88□□□□□ -1.95
SSBP1Q04837 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.88□□□□□ -1.95
SSBP1Q04837 RPS20P21-201ENST00000466859 343 ntBASIC2.88□□□□□ -1.95
SSBP1Q04837 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.88□□□□□ -1.95
SSBP1Q04837 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.88□□□□□ -1.95
SSBP1Q04837 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.88□□□□□ -1.95
SSBP1Q04837 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.88□□□□□ -1.95
SSBP1Q04837 FTH1P21-201ENST00000512179 511 ntBASIC2.88□□□□□ -1.95
SSBP1Q04837 RNA5SP228-201ENST00000516232 133 ntBASIC2.88□□□□□ -1.95
SSBP1Q04837 RNU6-352P-201ENST00000516908 107 ntBASIC2.88□□□□□ -1.95
SSBP1Q04837 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.88□□□□□ -1.95
SSBP1Q04837 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC2.88□□□□□ -1.95
SSBP1Q04837 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SSBP1Q04837 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC2.88□□□□□ -1.95
SSBP1Q04837 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.88□□□□□ -1.95
SSBP1Q04837 AC011477.5-201ENST00000586571 259 ntBASIC2.88□□□□□ -1.95
SSBP1Q04837 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.88□□□□□ -1.95
SSBP1Q04837 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSBP1Q04837 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSBP1Q04837 AC107081.3-201ENST00000612715 2034 ntBASIC2.88□□□□□ -1.95
SSBP1Q04837 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SSBP1Q04837 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.88□□□□□ -1.95
SSBP1Q04837 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC2.88□□□□□ -1.95
SSBP1Q04837 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSBP1Q04837 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSBP1Q04837 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SSBP1Q04837 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SSBP1Q04837 RNU6-1320P-201ENST00000390838 107 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 RNU6-1269P-201ENST00000391139 107 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.87□□□□□ -1.95
SSBP1Q04837 NDUFB4P5-201ENST00000415445 361 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.87□□□□□ -1.95
SSBP1Q04837 AC068287.1-201ENST00000430283 295 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 AC244505.4-201ENST00000434905 287 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.87□□□□□ -1.95
SSBP1Q04837 SSXP5-201ENST00000443473 287 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 CYCSP42-201ENST00000450823 238 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC2.87□□□□□ -1.95
SSBP1Q04837 RNU6-599P-201ENST00000459383 107 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 RNU6-1193P-201ENST00000459461 107 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 RPL35AP28-201ENST00000459730 331 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 OR5H3P-201ENST00000502817 919 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 AC112198.1-201ENST00000505369 1220 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SSBP1Q04837 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.87□□□□□ -1.95
SSBP1Q04837 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.87□□□□□ -1.95
SSBP1Q04837 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.87□□□□□ -1.95
SSBP1Q04837 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.87□□□□□ -1.95
SSBP1Q04837 AL606490.9-201ENST00000603331 271 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 AL354976.1-201ENST00000613843 387 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
SSBP1Q04837 RNU6-368P-201ENST00000620928 107 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 RNU6-538P-201ENST00000622329 107 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 AC015908.5-201ENST00000623289 343 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.87□□□□□ -1.95
SSBP1Q04837 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.87□□□□□ -1.95
SSBP1Q04837 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC2.87□□□□□ -1.95
SSBP1Q04837 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
SSBP1Q04837 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SSBP1Q04837 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SSBP1Q04837 MTND5P19-201ENST00000424872 1794 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SSBP1Q04837 HSPA8P17-201ENST00000427029 1382 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 OTUD4P1-201ENST00000237841 3067 ntBASIC2.87□□□□□ -1.95
SSBP1Q04837 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SSBP1Q04837 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.86□□□□□ -1.95
SSBP1Q04837 CCT8P1-201ENST00000413611 1657 ntBASIC2.86□□□□□ -1.95
SSBP1Q04837 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SSBP1Q04837 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms