Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RPL23AP61-201ENST00000623642 466 ntBASIC3.69□□□□□ -1.82
HMGCS1Q01581 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGCS1Q01581 AC119674.1-212ENST00000641155 993 ntBASIC3.69□□□□□ -1.82
HMGCS1Q01581 OR5AC4P-202ENST00000642086 985 ntBASIC3.69□□□□□ -1.82
HMGCS1Q01581 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HMGCS1Q01581 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HMGCS1Q01581 AC026951.1-201ENST00000559530 2459 ntBASIC3.69□□□□□ -1.82
HMGCS1Q01581 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HMGCS1Q01581 AL139811.1-201ENST00000424779 2299 ntBASIC3.69□□□□□ -1.82
HMGCS1Q01581 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.69□□□□□ -1.82
HMGCS1Q01581 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGCS1Q01581 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS1Q01581 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS1Q01581 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 AL136964.1-201ENST00000622038 2990 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 MAPK10-373ENST00000641983 6772 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 SNORA27.3-201ENST00000364937 134 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS1Q01581 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 MIR3074-201ENST00000384885 81 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 MIR199A2-201ENST00000385289 110 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS1Q01581 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 RSL24D1P8-201ENST00000434442 492 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 AL162151.2-201ENST00000448875 158 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 AL513343.1-201ENST00000451818 792 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 AC098824.1-201ENST00000453565 980 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 RN7SL93P-201ENST00000463035 293 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 RPS3AP6-201ENST00000484430 795 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 AC108064.1-201ENST00000513791 460 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 SUMO2P20-201ENST00000520803 283 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS1Q01581 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 MIR3160-1-201ENST00000577972 85 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 AC025946.2-201ENST00000603398 234 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 AC067959.1-201ENST00000604334 379 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 AC010857.1-201ENST00000606398 594 ntBASIC3.68□□□□□ -1.82
HMGCS1Q01581 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCS1Q01581 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS1Q01581 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS1Q01581 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS1Q01581 AC027287.1-201ENST00000553115 1453 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCS1Q01581 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC106871.1-201ENST00000568324 3102 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 RNA5SP283-201ENST00000365604 119 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCS1Q01581 PPIAP31-201ENST00000405422 495 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 RN7SKP263-201ENST00000411194 309 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 BTF3P9-201ENST00000418784 283 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 OR5AW1P-201ENST00000426334 1006 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AL606490.7-201ENST00000433136 191 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 SNORA71B-202ENST00000439232 272 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 DNAJC19P1-201ENST00000455312 319 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 CDH12P2-201ENST00000504393 298 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC016550.3-201ENST00000515706 767 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 RNU6-889P-201ENST00000517189 103 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 IGLVIV-53-201ENST00000520107 367 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 RFPL1S-203ENST00000539579 330 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 AL133457.1-201ENST00000564251 987 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC120057.2-201ENST00000571520 271 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC099489.2-201ENST00000574976 260 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 MIR4458-201ENST00000578872 75 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC015726.1-201ENST00000602353 681 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AL133247.2-201ENST00000603236 482 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 ABI1P1-201ENST00000603375 1120 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AL137849.1-201ENST00000604767 169 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms