Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCN7AQ01118 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.35□□□□□ -1.71
SCN7AQ01118 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCN7AQ01118 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.34□□□□□ -1.71
SCN7AQ01118 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.34□□□□□ -1.71
SCN7AQ01118 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.34□□□□□ -1.71
SCN7AQ01118 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SCN7AQ01118 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCN7AQ01118 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SCN7AQ01118 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCN7AQ01118 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.34□□□□□ -1.71
SCN7AQ01118 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.34□□□□□ -1.71
SCN7AQ01118 UBE2V1P1-201ENST00000430836 445 ntBASIC4.34□□□□□ -1.71
SCN7AQ01118 YWHAEP5-201ENST00000431545 765 ntBASIC4.34□□□□□ -1.71
SCN7AQ01118 AC097262.1-201ENST00000452559 548 ntBASIC4.34□□□□□ -1.71
SCN7AQ01118 RN7SL594P-201ENST00000470590 287 ntBASIC4.34□□□□□ -1.71
SCN7AQ01118 AC084357.1-201ENST00000473404 255 ntBASIC4.34□□□□□ -1.71
SCN7AQ01118 AC080014.1-201ENST00000496877 1201 ntBASIC4.34□□□□□ -1.71
SCN7AQ01118 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN7AQ01118 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN7AQ01118 AC112198.1-201ENST00000505369 1220 ntBASIC4.34□□□□□ -1.71
SCN7AQ01118 BTF3L4P4-201ENST00000506381 449 ntBASIC4.34□□□□□ -1.71
SCN7AQ01118 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN7AQ01118 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.34□□□□□ -1.71
SCN7AQ01118 MIR4513-201ENST00000581077 86 ntBASIC4.34□□□□□ -1.71
SCN7AQ01118 AC233280.2-201ENST00000603917 1070 ntBASIC4.34□□□□□ -1.71
SCN7AQ01118 AP003392.5-201ENST00000607857 415 ntBASIC4.34□□□□□ -1.71
SCN7AQ01118 AC084036.1-201ENST00000609190 508 ntBASIC4.34□□□□□ -1.71
SCN7AQ01118 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCN7AQ01118 AC024341.1-201ENST00000526444 1552 ntBASIC4.34□□□□□ -1.71
SCN7AQ01118 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCN7AQ01118 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SCN7AQ01118 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
SCN7AQ01118 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.34□□□□□ -1.72
SCN7AQ01118 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN7AQ01118 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN7AQ01118 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN7AQ01118 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN7AQ01118 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.33□□□□□ -1.72
SCN7AQ01118 SNORA38.1-201ENST00000364172 131 ntBASIC4.33□□□□□ -1.72
SCN7AQ01118 Y_RNA.500-201ENST00000384466 111 ntBASIC4.33□□□□□ -1.72
SCN7AQ01118 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SCN7AQ01118 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.33□□□□□ -1.72
SCN7AQ01118 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.33□□□□□ -1.72
SCN7AQ01118 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.33□□□□□ -1.72
SCN7AQ01118 AC135507.2-201ENST00000612443 309 ntBASIC4.33□□□□□ -1.72
SCN7AQ01118 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN7AQ01118 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
SCN7AQ01118 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.33□□□□□ -1.72
SCN7AQ01118 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SCN7AQ01118 AC017007.4-201ENST00000503353 1352 ntBASIC4.33□□□□□ -1.72
SCN7AQ01118 AC139713.2-215ENST00000641428 5037 ntBASIC4.33□□□□□ -1.72
SCN7AQ01118 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN7AQ01118 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN7AQ01118 GSTA8P-201ENST00000404253 637 ntBASIC4.32□□□□□ -1.72
SCN7AQ01118 RNA5SP229-201ENST00000410809 99 ntBASIC4.32□□□□□ -1.72
SCN7AQ01118 AL160275.2-201ENST00000412010 394 ntBASIC4.32□□□□□ -1.72
SCN7AQ01118 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCN7AQ01118 RN7SL504P-201ENST00000494496 287 ntBASIC4.32□□□□□ -1.72
SCN7AQ01118 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCN7AQ01118 EIF4BP1-201ENST00000554881 351 ntBASIC4.32□□□□□ -1.72
SCN7AQ01118 AL033523.1-201ENST00000605153 153 ntBASIC4.32□□□□□ -1.72
SCN7AQ01118 OR6C71P-202ENST00000641886 1107 ntBASIC4.32□□□□□ -1.72
SCN7AQ01118 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCN7AQ01118 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN7AQ01118 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN7AQ01118 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN7AQ01118 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN7AQ01118 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
SCN7AQ01118 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN7AQ01118 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN7AQ01118 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN7AQ01118 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN7AQ01118 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.32□□□□□ -1.72
SCN7AQ01118 OR1AA1P-201ENST00000419597 916 ntBASIC4.32□□□□□ -1.72
SCN7AQ01118 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.32□□□□□ -1.72
SCN7AQ01118 MTCO1P45-201ENST00000431457 267 ntBASIC4.32□□□□□ -1.72
SCN7AQ01118 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.32□□□□□ -1.72
SCN7AQ01118 IGKV2-26-201ENST00000518305 343 ntBASIC4.32□□□□□ -1.72
SCN7AQ01118 AC022882.1-201ENST00000532142 501 ntBASIC4.32□□□□□ -1.72
SCN7AQ01118 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN7AQ01118 AC009464.1-201ENST00000615731 469 ntBASIC4.32□□□□□ -1.72
SCN7AQ01118 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN7AQ01118 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCN7AQ01118 MTND4P26-201ENST00000415971 1359 ntBASIC4.31□□□□□ -1.72
SCN7AQ01118 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCN7AQ01118 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCN7AQ01118 RNU1-18P-201ENST00000363062 164 ntBASIC4.31□□□□□ -1.72
SCN7AQ01118 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SCN7AQ01118 UBA52P6-201ENST00000399822 382 ntBASIC4.31□□□□□ -1.72
SCN7AQ01118 IFNNP1-201ENST00000429219 553 ntBASIC4.31□□□□□ -1.72
SCN7AQ01118 RPL23AP71-201ENST00000470966 469 ntBASIC4.31□□□□□ -1.72
SCN7AQ01118 HMGB1P21-201ENST00000502313 581 ntBASIC4.31□□□□□ -1.72
SCN7AQ01118 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.31□□□□□ -1.72
SCN7AQ01118 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN7AQ01118 HMGB3P13-201ENST00000511263 607 ntBASIC4.31□□□□□ -1.72
SCN7AQ01118 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.31□□□□□ -1.72
SCN7AQ01118 AL121594.4-201ENST00000556211 1196 ntBASIC4.31□□□□□ -1.72
SCN7AQ01118 AC092868.3-201ENST00000560515 784 ntBASIC4.31□□□□□ -1.72
SCN7AQ01118 AL360157.1-201ENST00000565962 87 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms