Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.85□□□□□ -1.95
CCL20P78556 AC025857.1-201ENST00000525252 377 ntBASIC2.85□□□□□ -1.95
CCL20P78556 AP000926.4-201ENST00000527351 454 ntBASIC2.85□□□□□ -1.95
CCL20P78556 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.85□□□□□ -1.95
CCL20P78556 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.85□□□□□ -1.95
CCL20P78556 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CCL20P78556 AC026333.2-201ENST00000542164 106 ntBASIC2.85□□□□□ -1.95
CCL20P78556 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC2.85□□□□□ -1.95
CCL20P78556 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.85□□□□□ -1.95
CCL20P78556 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.85□□□□□ -1.95
CCL20P78556 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC2.85□□□□□ -1.95
CCL20P78556 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.85□□□□□ -1.95
CCL20P78556 AC117490.2-201ENST00000610042 594 ntBASIC2.85□□□□□ -1.95
CCL20P78556 AC055764.2-201ENST00000610089 670 ntBASIC2.85□□□□□ -1.95
CCL20P78556 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC2.85□□□□□ -1.95
CCL20P78556 AC138649.5-201ENST00000637456 137 ntBASIC2.85□□□□□ -1.95
CCL20P78556 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
CCL20P78556 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCL20P78556 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.85□□□□□ -1.95
CCL20P78556 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CCL20P78556 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCL20P78556 AC025125.1-201ENST00000624743 1922 ntBASIC2.85□□□□□ -1.95
CCL20P78556 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.85□□□□□ -1.95
CCL20P78556 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCL20P78556 AL359715.4-201ENST00000606629 1436 ntBASIC2.85□□□□□ -1.95
CCL20P78556 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCL20P78556 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCL20P78556 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.84□□□□□ -1.95
CCL20P78556 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.84□□□□□ -1.95
CCL20P78556 AL592494.2-201ENST00000425455 1548 ntBASIC2.84□□□□□ -1.95
CCL20P78556 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CCL20P78556 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCL20P78556 RNU6-618P-201ENST00000363518 112 ntBASIC2.84□□□□□ -1.95
CCL20P78556 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CCL20P78556 RNA5SP498-201ENST00000411342 120 ntBASIC2.84□□□□□ -1.95
CCL20P78556 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.84□□□□□ -1.95
CCL20P78556 AC011933.1-201ENST00000413334 321 ntBASIC2.84□□□□□ -1.95
CCL20P78556 RANP4-201ENST00000413361 655 ntBASIC2.84□□□□□ -1.95
CCL20P78556 AC093578.1-201ENST00000415219 368 ntBASIC2.84□□□□□ -1.95
CCL20P78556 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.84□□□□□ -1.95
CCL20P78556 MRPS18BP2-201ENST00000434310 759 ntBASIC2.84□□□□□ -1.95
CCL20P78556 AL031663.1-201ENST00000437445 219 ntBASIC2.84□□□□□ -1.95
CCL20P78556 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCL20P78556 AL353898.1-201ENST00000444055 238 ntBASIC2.84□□□□□ -1.95
CCL20P78556 VN1R48P-201ENST00000448149 1036 ntBASIC2.84□□□□□ -1.95
CCL20P78556 AL162151.2-201ENST00000448875 158 ntBASIC2.84□□□□□ -1.95
CCL20P78556 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCL20P78556 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.84□□□□□ -1.95
CCL20P78556 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCL20P78556 TVP23BP2-201ENST00000455082 615 ntBASIC2.84□□□□□ -1.95
CCL20P78556 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC2.84□□□□□ -1.95
CCL20P78556 MTND2P28-201ENST00000457540 1044 ntBASIC2.84□□□□□ -1.95
CCL20P78556 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.84□□□□□ -1.95
CCL20P78556 AC116533.1-201ENST00000459748 321 ntBASIC2.84□□□□□ -1.95
CCL20P78556 AC104629.2-201ENST00000468627 598 ntBASIC2.84□□□□□ -1.95
CCL20P78556 RPS3AP6-201ENST00000484430 795 ntBASIC2.84□□□□□ -1.95
CCL20P78556 AC004453.1-201ENST00000487895 408 ntBASIC2.84□□□□□ -1.95
CCL20P78556 RPL30P11-201ENST00000495304 339 ntBASIC2.84□□□□□ -1.95
CCL20P78556 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.84□□□□□ -1.95
CCL20P78556 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCL20P78556 NDUFB5P1-201ENST00000508134 564 ntBASIC2.84□□□□□ -1.95
CCL20P78556 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.84□□□□□ -1.95
CCL20P78556 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
CCL20P78556 AC034244.2-201ENST00000514668 858 ntBASIC2.84□□□□□ -1.95
CCL20P78556 RNA5SP164-201ENST00000516533 110 ntBASIC2.84□□□□□ -1.95
CCL20P78556 RNU6-1308P-201ENST00000516817 103 ntBASIC2.84□□□□□ -1.95
CCL20P78556 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.84□□□□□ -1.95
CCL20P78556 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.84□□□□□ -1.95
CCL20P78556 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC2.84□□□□□ -1.95
CCL20P78556 MIR3138-201ENST00000585238 82 ntBASIC2.84□□□□□ -1.95
CCL20P78556 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.84□□□□□ -1.95
CCL20P78556 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.84□□□□□ -1.95
CCL20P78556 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.84□□□□□ -1.95
CCL20P78556 MIR6780A-201ENST00000615089 68 ntBASIC2.84□□□□□ -1.95
CCL20P78556 AL590410.1-201ENST00000617925 333 ntBASIC2.84□□□□□ -1.95
CCL20P78556 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC2.84□□□□□ -1.95
CCL20P78556 CR392039.4-201ENST00000624968 501 ntBASIC2.84□□□□□ -1.95
CCL20P78556 CGA-206ENST00000630630 832 ntTSL 2 BASIC2.84□□□□□ -1.95
CCL20P78556 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCL20P78556 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCL20P78556 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.84□□□□□ -1.96
CCL20P78556 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCL20P78556 AC087565.3-202ENST00000642085 1603 ntBASIC2.83□□□□□ -1.96
CCL20P78556 MTND5P27-201ENST00000428871 1720 ntBASIC2.83□□□□□ -1.96
CCL20P78556 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCL20P78556 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CCL20P78556 SNORD56.3-201ENST00000363507 71 ntBASIC2.83□□□□□ -1.96
CCL20P78556 RNA5SP167-201ENST00000365461 116 ntBASIC2.83□□□□□ -1.96
CCL20P78556 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCL20P78556 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCL20P78556 RPS3AP23-201ENST00000401762 784 ntBASIC2.83□□□□□ -1.96
CCL20P78556 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC2.83□□□□□ -1.96
CCL20P78556 RPS26P13-201ENST00000419030 330 ntBASIC2.83□□□□□ -1.96
CCL20P78556 RPL31P45-201ENST00000419532 356 ntBASIC2.83□□□□□ -1.96
CCL20P78556 FAR2P4-202ENST00000425399 584 ntBASIC2.83□□□□□ -1.96
CCL20P78556 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC2.83□□□□□ -1.96
CCL20P78556 MTCO1P45-201ENST00000431457 267 ntBASIC2.83□□□□□ -1.96
CCL20P78556 OR6C71P-201ENST00000432580 913 ntBASIC2.83□□□□□ -1.96
CCL20P78556 MTCO1P52-201ENST00000433928 531 ntBASIC2.83□□□□□ -1.96
CCL20P78556 CBX1P4-201ENST00000439415 457 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms