Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.34□□□□□ -2.03
RPL39P62891 AC009951.1-201ENST00000623674 2614 ntBASIC2.34□□□□□ -2.03
RPL39P62891 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.34□□□□□ -2.03
RPL39P62891 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RPL39P62891 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.34□□□□□ -2.03
RPL39P62891 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.34□□□□□ -2.03
RPL39P62891 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.34□□□□□ -2.03
RPL39P62891 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
RPL39P62891 U3.6-201ENST00000363622 211 ntBASIC2.34□□□□□ -2.03
RPL39P62891 RNA5SP51-201ENST00000364750 119 ntBASIC2.34□□□□□ -2.03
RPL39P62891 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RPL39P62891 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
RPL39P62891 SNORD3H-201ENST00000384486 214 ntBASIC2.34□□□□□ -2.03
RPL39P62891 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RPL39P62891 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RPL39P62891 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.34□□□□□ -2.03
RPL39P62891 CEACAMP9-201ENST00000442990 513 ntBASIC2.34□□□□□ -2.03
RPL39P62891 AP002884.2-201ENST00000471647 395 ntBASIC2.34□□□□□ -2.03
RPL39P62891 VN1R105P-201ENST00000486595 910 ntBASIC2.34□□□□□ -2.03
RPL39P62891 AC112198.1-201ENST00000505369 1220 ntBASIC2.34□□□□□ -2.03
RPL39P62891 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.34□□□□□ -2.03
RPL39P62891 C1GALT1P3-201ENST00000522049 819 ntBASIC2.34□□□□□ -2.03
RPL39P62891 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RPL39P62891 AC015917.1-201ENST00000579654 510 ntBASIC2.34□□□□□ -2.03
RPL39P62891 AC006116.10-201ENST00000591836 581 ntBASIC2.34□□□□□ -2.03
RPL39P62891 AC011816.2-201ENST00000607089 556 ntBASIC2.34□□□□□ -2.03
RPL39P62891 AC107294.3-201ENST00000609211 526 ntBASIC2.34□□□□□ -2.03
RPL39P62891 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.34□□□□□ -2.03
RPL39P62891 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.34□□□□□ -2.03
RPL39P62891 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
RPL39P62891 AP000756.2-201ENST00000624168 2567 ntBASIC2.34□□□□□ -2.04
RPL39P62891 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.33□□□□□ -2.04
RPL39P62891 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC2.33□□□□□ -2.04
RPL39P62891 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RPL39P62891 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RPL39P62891 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RPL39P62891 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.33□□□□□ -2.04
RPL39P62891 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.33□□□□□ -2.04
RPL39P62891 RPL21P3-201ENST00000395517 478 ntBASIC2.33□□□□□ -2.04
RPL39P62891 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RPL39P62891 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.33□□□□□ -2.04
RPL39P62891 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.33□□□□□ -2.04
RPL39P62891 ARF4P2-201ENST00000430209 526 ntBASIC2.33□□□□□ -2.04
RPL39P62891 OR4C10P-201ENST00000434991 931 ntBASIC2.33□□□□□ -2.04
RPL39P62891 Z99127.3-201ENST00000448158 395 ntBASIC2.33□□□□□ -2.04
RPL39P62891 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.33□□□□□ -2.04
RPL39P62891 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.33□□□□□ -2.04
RPL39P62891 U3.44-201ENST00000458938 192 ntBASIC2.33□□□□□ -2.04
RPL39P62891 AC146507.2-201ENST00000460608 476 ntBASIC2.33□□□□□ -2.04
RPL39P62891 RN7SL330P-201ENST00000469709 307 ntBASIC2.33□□□□□ -2.04
RPL39P62891 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RPL39P62891 AC093278.1-201ENST00000494700 600 ntBASIC2.33□□□□□ -2.04
RPL39P62891 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.33□□□□□ -2.04
RPL39P62891 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.33□□□□□ -2.04
RPL39P62891 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RPL39P62891 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC2.33□□□□□ -2.04
RPL39P62891 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RPL39P62891 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.33□□□□□ -2.04
RPL39P62891 AC053481.4-201ENST00000583164 216 ntBASIC2.33□□□□□ -2.04
RPL39P62891 VN1R79P-201ENST00000593540 513 ntBASIC2.33□□□□□ -2.04
RPL39P62891 AC116651.1-201ENST00000609724 556 ntBASIC2.33□□□□□ -2.04
RPL39P62891 SNORD39.4-201ENST00000620099 78 ntBASIC2.33□□□□□ -2.04
RPL39P62891 AC091903.1-201ENST00000624322 454 ntBASIC2.33□□□□□ -2.04
RPL39P62891 AL355480.1-201ENST00000629041 99 ntBASIC2.33□□□□□ -2.04
RPL39P62891 MIR6830-201ENST00000636015 70 ntBASIC2.33□□□□□ -2.04
RPL39P62891 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.33□□□□□ -2.04
RPL39P62891 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.33□□□□□ -2.04
RPL39P62891 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.33□□□□□ -2.04
RPL39P62891 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
RPL39P62891 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.33□□□□□ -2.04
RPL39P62891 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RPL39P62891 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
RPL39P62891 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
RPL39P62891 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RPL39P62891 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RPL39P62891 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.32□□□□□ -2.04
RPL39P62891 EXOC5P1-201ENST00000510543 1969 ntBASIC2.32□□□□□ -2.04
RPL39P62891 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
RPL39P62891 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
RPL39P62891 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
RPL39P62891 MTND5P24-201ENST00000438892 1767 ntBASIC2.32□□□□□ -2.04
RPL39P62891 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC2.32□□□□□ -2.04
RPL39P62891 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RPL39P62891 SNORA70E-201ENST00000384492 135 ntBASIC2.32□□□□□ -2.04
RPL39P62891 AC007066.1-201ENST00000392902 381 ntBASIC2.32□□□□□ -2.04
RPL39P62891 AL512430.2-201ENST00000406786 339 ntBASIC2.32□□□□□ -2.04
RPL39P62891 RNU6-628P-201ENST00000410675 107 ntBASIC2.32□□□□□ -2.04
RPL39P62891 ATP5A1P2-201ENST00000412323 255 ntBASIC2.32□□□□□ -2.04
RPL39P62891 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RPL39P62891 AC012065.2-201ENST00000421295 375 ntBASIC2.32□□□□□ -2.04
RPL39P62891 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.32□□□□□ -2.04
RPL39P62891 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC2.32□□□□□ -2.04
RPL39P62891 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC2.32□□□□□ -2.04
RPL39P62891 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.32□□□□□ -2.04
RPL39P62891 HSFY6P-201ENST00000445573 403 ntBASIC2.32□□□□□ -2.04
RPL39P62891 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.32□□□□□ -2.04
RPL39P62891 RN7SL75P-201ENST00000461926 281 ntBASIC2.32□□□□□ -2.04
RPL39P62891 UBE2CP3-201ENST00000502715 450 ntBASIC2.32□□□□□ -2.04
RPL39P62891 RNA5SP380-201ENST00000517190 98 ntBASIC2.32□□□□□ -2.04
RPL39P62891 RAB9BP1-201ENST00000519581 626 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms