Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.4□□□□□ -1.87
ACTBP60709 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.4□□□□□ -1.87
ACTBP60709 AC025627.2-201ENST00000576220 160 ntBASIC3.4□□□□□ -1.87
ACTBP60709 KPNA2P3-201ENST00000584190 848 ntBASIC3.4□□□□□ -1.87
ACTBP60709 MIR5684-201ENST00000585074 65 ntBASIC3.4□□□□□ -1.87
ACTBP60709 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ACTBP60709 AL121890.3-201ENST00000618494 516 ntBASIC3.4□□□□□ -1.87
ACTBP60709 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.4□□□□□ -1.87
ACTBP60709 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ACTBP60709 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
ACTBP60709 MTND5P3-201ENST00000438536 1800 ntBASIC3.4□□□□□ -1.87
ACTBP60709 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
ACTBP60709 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ACTBP60709 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.39□□□□□ -1.87
ACTBP60709 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.39□□□□□ -1.87
ACTBP60709 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.39□□□□□ -1.87
ACTBP60709 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ACTBP60709 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
ACTBP60709 RNA5SP295-201ENST00000362655 121 ntBASIC3.39□□□□□ -1.87
ACTBP60709 RNU1-32P-201ENST00000363937 159 ntBASIC3.39□□□□□ -1.87
ACTBP60709 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.39□□□□□ -1.87
ACTBP60709 BTF3P9-201ENST00000418784 283 ntBASIC3.39□□□□□ -1.87
ACTBP60709 AL049610.1-201ENST00000423374 372 ntBASIC3.39□□□□□ -1.87
ACTBP60709 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.39□□□□□ -1.87
ACTBP60709 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.39□□□□□ -1.87
ACTBP60709 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.39□□□□□ -1.87
ACTBP60709 SKP1P1-201ENST00000438081 489 ntBASIC3.39□□□□□ -1.87
ACTBP60709 CBX1P4-201ENST00000439415 457 ntBASIC3.39□□□□□ -1.87
ACTBP60709 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ACTBP60709 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.39□□□□□ -1.87
ACTBP60709 AC092691.2-201ENST00000461787 803 ntBASIC3.39□□□□□ -1.87
ACTBP60709 RPL5P13-201ENST00000462840 709 ntBASIC3.39□□□□□ -1.87
ACTBP60709 RPL7P24-201ENST00000493052 752 ntBASIC3.39□□□□□ -1.87
ACTBP60709 RN7SL691P-201ENST00000494487 301 ntBASIC3.39□□□□□ -1.87
ACTBP60709 IGBP1P5-201ENST00000507524 1000 ntBASIC3.39□□□□□ -1.87
ACTBP60709 KRT19P6-201ENST00000510983 209 ntBASIC3.39□□□□□ -1.87
ACTBP60709 AC008958.1-201ENST00000511047 682 ntBASIC3.39□□□□□ -1.87
ACTBP60709 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
ACTBP60709 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.39□□□□□ -1.87
ACTBP60709 RN7SKP83-201ENST00000516512 178 ntBASIC3.39□□□□□ -1.87
ACTBP60709 RN7SKP209-201ENST00000516888 304 ntBASIC3.39□□□□□ -1.87
ACTBP60709 RN7SKP234-201ENST00000517173 224 ntBASIC3.39□□□□□ -1.87
ACTBP60709 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.39□□□□□ -1.87
ACTBP60709 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.39□□□□□ -1.87
ACTBP60709 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.39□□□□□ -1.87
ACTBP60709 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.39□□□□□ -1.87
ACTBP60709 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.39□□□□□ -1.87
ACTBP60709 AC115989.2-201ENST00000578640 563 ntBASIC3.39□□□□□ -1.87
ACTBP60709 MIR4284-201ENST00000578924 81 ntBASIC3.39□□□□□ -1.87
ACTBP60709 AC069366.1-201ENST00000583159 838 ntBASIC3.39□□□□□ -1.87
ACTBP60709 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ACTBP60709 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ACTBP60709 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ACTBP60709 MIR7641-1-201ENST00000627518 61 ntBASIC3.39□□□□□ -1.87
ACTBP60709 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ACTBP60709 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ACTBP60709 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
ACTBP60709 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ACTBP60709 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
ACTBP60709 AL353746.1-201ENST00000566293 6881 ntBASIC3.38□□□□□ -1.87
ACTBP60709 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ACTBP60709 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ACTBP60709 RNU1-132P-201ENST00000364300 164 ntBASIC3.38□□□□□ -1.87
ACTBP60709 SNORA70E-201ENST00000384492 135 ntBASIC3.38□□□□□ -1.87
ACTBP60709 MIR141-201ENST00000384975 95 ntBASIC3.38□□□□□ -1.87
ACTBP60709 MIR591-201ENST00000385290 95 ntBASIC3.38□□□□□ -1.87
ACTBP60709 RNU4-25P-201ENST00000410569 230 ntBASIC3.38□□□□□ -1.87
ACTBP60709 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.38□□□□□ -1.87
ACTBP60709 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.38□□□□□ -1.87
ACTBP60709 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.38□□□□□ -1.87
ACTBP60709 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ACTBP60709 AL592293.2-201ENST00000422292 996 ntBASIC3.38□□□□□ -1.87
ACTBP60709 RPL18P10-201ENST00000425606 538 ntBASIC3.38□□□□□ -1.87
ACTBP60709 NIPA2P1-201ENST00000426223 976 ntBASIC3.38□□□□□ -1.87
ACTBP60709 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.38□□□□□ -1.87
ACTBP60709 HIGD1AP4-201ENST00000430194 280 ntBASIC3.38□□□□□ -1.87
ACTBP60709 AL358472.1-201ENST00000431295 329 ntBASIC3.38□□□□□ -1.87
ACTBP60709 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.38□□□□□ -1.87
ACTBP60709 AC023347.2-201ENST00000433994 462 ntBASIC3.38□□□□□ -1.87
ACTBP60709 AC105402.2-201ENST00000438503 358 ntBASIC3.38□□□□□ -1.87
ACTBP60709 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.38□□□□□ -1.87
ACTBP60709 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.38□□□□□ -1.87
ACTBP60709 AC239367.2-201ENST00000447309 705 ntBASIC3.38□□□□□ -1.87
ACTBP60709 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.38□□□□□ -1.87
ACTBP60709 AC009220.1-201ENST00000451614 275 ntBASIC3.38□□□□□ -1.87
ACTBP60709 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.38□□□□□ -1.87
ACTBP60709 AC010285.3-201ENST00000511668 676 ntBASIC3.38□□□□□ -1.87
ACTBP60709 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.38□□□□□ -1.87
ACTBP60709 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.38□□□□□ -1.87
ACTBP60709 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.38□□□□□ -1.87
ACTBP60709 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.38□□□□□ -1.87
ACTBP60709 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.38□□□□□ -1.87
ACTBP60709 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.38□□□□□ -1.87
ACTBP60709 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.38□□□□□ -1.87
ACTBP60709 IPO5P1-202ENST00000600039 287 ntBASIC3.38□□□□□ -1.87
ACTBP60709 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.38□□□□□ -1.87
ACTBP60709 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.38□□□□□ -1.87
ACTBP60709 BRDTP1-201ENST00000605735 677 ntBASIC3.38□□□□□ -1.87
ACTBP60709 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.38□□□□□ -1.87
ACTBP60709 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms