Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLRN1P58418 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLRN1P58418 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.84□□□□□ -1.63
CLRN1P58418 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLRN1P58418 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CLRN1P58418 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLRN1P58418 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLRN1P58418 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLRN1P58418 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
CLRN1P58418 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.64
CLRN1P58418 AC009313.2-201ENST00000417893 1941 ntBASIC4.84□□□□□ -1.64
CLRN1P58418 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.84□□□□□ -1.64
CLRN1P58418 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
CLRN1P58418 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
CLRN1P58418 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.83□□□□□ -1.64
CLRN1P58418 AC100757.1-201ENST00000616872 1835 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLRN1P58418 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLRN1P58418 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.83□□□□□ -1.64
CLRN1P58418 SMG1P7-201ENST00000565246 2704 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
CLRN1P58418 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLRN1P58418 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.83□□□□□ -1.64
CLRN1P58418 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
CLRN1P58418 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLRN1P58418 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLRN1P58418 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLRN1P58418 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLRN1P58418 Y_RNA.88-201ENST00000363029 99 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CLRN1P58418 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CLRN1P58418 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.83□□□□□ -1.64
CLRN1P58418 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CLRN1P58418 GSTM3P2-201ENST00000412746 530 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.83□□□□□ -1.64
CLRN1P58418 AL354766.1-201ENST00000423396 542 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.83□□□□□ -1.64
CLRN1P58418 DPPA2P1-201ENST00000428060 556 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.83□□□□□ -1.64
CLRN1P58418 FTLP19-201ENST00000433300 394 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 GSTM5P1-201ENST00000434751 660 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 FHP1-201ENST00000442741 703 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.83□□□□□ -1.64
CLRN1P58418 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.83□□□□□ -1.64
CLRN1P58418 RPS3AP17-201ENST00000472594 777 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.83□□□□□ -1.64
CLRN1P58418 AC114981.1-201ENST00000503897 678 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 MYL12BP2-201ENST00000503948 512 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.83□□□□□ -1.64
CLRN1P58418 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.83□□□□□ -1.64
CLRN1P58418 HMGN1P9-201ENST00000515212 298 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 snoU109.6-201ENST00000516831 118 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.83□□□□□ -1.64
CLRN1P58418 OR5M2P-201ENST00000529003 936 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 OR4A12P-201ENST00000530847 918 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 AP004609.2-201ENST00000532177 190 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.83□□□□□ -1.64
CLRN1P58418 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.83□□□□□ -1.64
CLRN1P58418 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.83□□□□□ -1.64
CLRN1P58418 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.83□□□□□ -1.64
CLRN1P58418 AC124947.2-202ENST00000552735 133 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.83□□□□□ -1.64
CLRN1P58418 AC006960.3-201ENST00000561845 705 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 AP005205.1-201ENST00000563503 508 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.83□□□□□ -1.64
CLRN1P58418 MIR544B-201ENST00000582372 78 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 AP000769.2-201ENST00000602344 396 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 FO393422.1-201ENST00000603908 708 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 AC233280.2-201ENST00000603917 1070 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 AP000860.1-201ENST00000605250 559 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLRN1P58418 RN7SL787P-201ENST00000613000 284 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLRN1P58418 AC104010.1-201ENST00000616889 150 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLRN1P58418 CR381653.2-201ENST00000624041 768 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.83□□□□□ -1.64
CLRN1P58418 AP005432.1-201ENST00000580891 3485 ntBASIC4.83□□□□□ -1.64
CLRN1P58418 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLRN1P58418 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLRN1P58418 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLRN1P58418 AL034370.1-201ENST00000397254 1590 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLRN1P58418 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.82□□□□□ -1.64
CLRN1P58418 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.82□□□□□ -1.64
CLRN1P58418 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLRN1P58418 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLRN1P58418 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLRN1P58418 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLRN1P58418 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLRN1P58418 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.82□□□□□ -1.64
CLRN1P58418 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLRN1P58418 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.82□□□□□ -1.64
CLRN1P58418 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.82□□□□□ -1.64
CLRN1P58418 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLRN1P58418 RNU6-809P-201ENST00000384461 107 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 MIR181A1-201ENST00000385026 110 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 MIR320C1-201ENST00000408566 88 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms