Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VSX2P58304 MRPS33P4-201ENST00000434892 317 ntBASIC3.72□□□□□ -1.81
VSX2P58304 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VSX2P58304 PPIAP17-201ENST00000438507 471 ntBASIC3.72□□□□□ -1.81
VSX2P58304 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.72□□□□□ -1.81
VSX2P58304 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.72□□□□□ -1.81
VSX2P58304 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.72□□□□□ -1.81
VSX2P58304 RPL7P31-201ENST00000450192 724 ntBASIC3.72□□□□□ -1.81
VSX2P58304 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.72□□□□□ -1.81
VSX2P58304 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.72□□□□□ -1.81
VSX2P58304 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.72□□□□□ -1.81
VSX2P58304 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.72□□□□□ -1.81
VSX2P58304 AC091959.2-201ENST00000477363 321 ntBASIC3.72□□□□□ -1.81
VSX2P58304 RPL21P129-201ENST00000491732 478 ntBASIC3.72□□□□□ -1.81
VSX2P58304 RPL31P61-201ENST00000496160 376 ntBASIC3.72□□□□□ -1.81
VSX2P58304 SNORA70.17-201ENST00000516449 133 ntBASIC3.72□□□□□ -1.81
VSX2P58304 RNU6-352P-201ENST00000516908 107 ntBASIC3.72□□□□□ -1.81
VSX2P58304 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.72□□□□□ -1.81
VSX2P58304 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.72□□□□□ -1.81
VSX2P58304 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.72□□□□□ -1.81
VSX2P58304 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.72□□□□□ -1.81
VSX2P58304 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VSX2P58304 AC141257.3-201ENST00000572906 215 ntBASIC3.72□□□□□ -1.81
VSX2P58304 AC107982.3-201ENST00000584957 985 ntBASIC3.72□□□□□ -1.81
VSX2P58304 AC006130.2-201ENST00000586202 326 ntBASIC3.72□□□□□ -1.81
VSX2P58304 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.72□□□□□ -1.81
VSX2P58304 AC128687.2-201ENST00000609657 566 ntBASIC3.72□□□□□ -1.81
VSX2P58304 AC245389.2-201ENST00000616023 576 ntBASIC3.72□□□□□ -1.81
VSX2P58304 AC016957.2-201ENST00000616998 848 ntBASIC3.72□□□□□ -1.81
VSX2P58304 AC242843.1-201ENST00000618702 573 ntBASIC3.72□□□□□ -1.81
VSX2P58304 FP236240.3-201ENST00000623061 327 ntBASIC3.72□□□□□ -1.81
VSX2P58304 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.72□□□□□ -1.81
VSX2P58304 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.72□□□□□ -1.81
VSX2P58304 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
VSX2P58304 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.72□□□□□ -1.81
VSX2P58304 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
VSX2P58304 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VSX2P58304 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.72□□□□□ -1.81
VSX2P58304 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
VSX2P58304 AC009229.4-201ENST00000623854 1947 ntBASIC3.72□□□□□ -1.81
VSX2P58304 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
VSX2P58304 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
VSX2P58304 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
VSX2P58304 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.81
VSX2P58304 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.71□□□□□ -1.82
VSX2P58304 MTCO1P8-201ENST00000416914 1523 ntBASIC3.71□□□□□ -1.82
VSX2P58304 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
VSX2P58304 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VSX2P58304 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.71□□□□□ -1.82
VSX2P58304 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
VSX2P58304 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VSX2P58304 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
VSX2P58304 MIR320B1-201ENST00000390209 79 ntBASIC3.71□□□□□ -1.82
VSX2P58304 RN7SKP202-201ENST00000410439 330 ntBASIC3.71□□□□□ -1.82
VSX2P58304 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.71□□□□□ -1.82
VSX2P58304 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.71□□□□□ -1.82
VSX2P58304 AC048351.1-201ENST00000420064 602 ntBASIC3.71□□□□□ -1.82
VSX2P58304 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.71□□□□□ -1.82
VSX2P58304 RNF19BPX-201ENST00000426224 625 ntBASIC3.71□□□□□ -1.82
VSX2P58304 HMGB3P5-201ENST00000428894 612 ntBASIC3.71□□□□□ -1.82
VSX2P58304 MTCO3P21-201ENST00000430791 643 ntBASIC3.71□□□□□ -1.82
VSX2P58304 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.71□□□□□ -1.82
VSX2P58304 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.71□□□□□ -1.82
VSX2P58304 EXTL2P1-201ENST00000446218 416 ntBASIC3.71□□□□□ -1.82
VSX2P58304 AL627224.1-201ENST00000448334 444 ntBASIC3.71□□□□□ -1.82
VSX2P58304 AL354710.1-201ENST00000453641 246 ntBASIC3.71□□□□□ -1.82
VSX2P58304 AC005229.2-201ENST00000456995 399 ntBASIC3.71□□□□□ -1.82
VSX2P58304 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.71□□□□□ -1.82
VSX2P58304 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.71□□□□□ -1.82
VSX2P58304 AC106872.2-201ENST00000494303 480 ntBASIC3.71□□□□□ -1.82
VSX2P58304 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.71□□□□□ -1.82
VSX2P58304 SLC25A15P5-201ENST00000508033 253 ntBASIC3.71□□□□□ -1.82
VSX2P58304 FABP5P6-201ENST00000510588 409 ntBASIC3.71□□□□□ -1.82
VSX2P58304 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.71□□□□□ -1.82
VSX2P58304 SAP18P1-201ENST00000512058 390 ntBASIC3.71□□□□□ -1.82
VSX2P58304 IGKV2D-23-201ENST00000518179 286 ntBASIC3.71□□□□□ -1.82
VSX2P58304 MTCO1P49-201ENST00000523429 802 ntBASIC3.71□□□□□ -1.82
VSX2P58304 OR4V1P-201ENST00000525394 1140 ntBASIC3.71□□□□□ -1.82
VSX2P58304 AC090953.1-201ENST00000604305 1092 ntBASIC3.71□□□□□ -1.82
VSX2P58304 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.71□□□□□ -1.82
VSX2P58304 AF001550.2-201ENST00000636643 217 ntBASIC3.71□□□□□ -1.82
VSX2P58304 AC119674.1-220ENST00000641502 1048 ntBASIC3.71□□□□□ -1.82
VSX2P58304 AC006042.3-201ENST00000454684 1469 ntBASIC3.71□□□□□ -1.82
VSX2P58304 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VSX2P58304 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
VSX2P58304 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VSX2P58304 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VSX2P58304 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.7□□□□□ -1.82
VSX2P58304 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.7□□□□□ -1.82
VSX2P58304 RNU6-225P-201ENST00000384613 103 ntBASIC3.7□□□□□ -1.82
VSX2P58304 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
VSX2P58304 CYCSP19-201ENST00000411715 316 ntBASIC3.7□□□□□ -1.82
VSX2P58304 RPL26P37-201ENST00000411983 438 ntBASIC3.7□□□□□ -1.82
VSX2P58304 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VSX2P58304 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.7□□□□□ -1.82
VSX2P58304 AC044797.1-201ENST00000445744 679 ntBASIC3.7□□□□□ -1.82
VSX2P58304 CYCSP53-201ENST00000455540 265 ntBASIC3.7□□□□□ -1.82
VSX2P58304 SNORA84-201ENST00000459229 133 ntBASIC3.7□□□□□ -1.82
VSX2P58304 AC021205.1-201ENST00000468797 348 ntBASIC3.7□□□□□ -1.82
VSX2P58304 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms