Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RPL36AP15-201ENST00000444514 266 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.75□□□□□ -1.65
SUMO3P55854 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.75□□□□□ -1.65
SUMO3P55854 USP9YP34-201ENST00000453983 808 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 RNU7-136P-201ENST00000458819 69 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 RPL5P22-201ENST00000480199 884 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.75□□□□□ -1.65
SUMO3P55854 FAM172BP-201ENST00000487497 1089 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.75□□□□□ -1.65
SUMO3P55854 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
SUMO3P55854 AC010424.1-201ENST00000506336 297 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 AC091965.2-201ENST00000512324 613 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.75□□□□□ -1.65
SUMO3P55854 MTND3P5-201ENST00000512798 333 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
SUMO3P55854 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.75□□□□□ -1.65
SUMO3P55854 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.75□□□□□ -1.65
SUMO3P55854 AC027369.5-201ENST00000533838 755 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 AC092470.1-201ENST00000546187 132 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 MAGOH2P-202ENST00000584384 429 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SUMO3P55854 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.75□□□□□ -1.65
SUMO3P55854 U73023.1-201ENST00000603134 700 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 SUMO2P15-201ENST00000604285 278 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 AC107214.2-201ENST00000608204 634 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.75□□□□□ -1.65
SUMO3P55854 AC025588.4-201ENST00000615802 908 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.75□□□□□ -1.65
SUMO3P55854 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.75□□□□□ -1.65
SUMO3P55854 LINC01739-205ENST00000641890 573 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SUMO3P55854 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SUMO3P55854 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.75□□□□□ -1.65
SUMO3P55854 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SUMO3P55854 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SUMO3P55854 MTCO1P23-201ENST00000415223 1526 ntBASIC4.75□□□□□ -1.65
SUMO3P55854 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SUMO3P55854 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
SUMO3P55854 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SUMO3P55854 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.75□□□□□ -1.65
SUMO3P55854 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SUMO3P55854 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.75□□□□□ -1.65
SUMO3P55854 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
SUMO3P55854 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SUMO3P55854 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 MAPK10-304ENST00000641341 3984 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.74□□□□□ -1.65
SUMO3P55854 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.74□□□□□ -1.65
SUMO3P55854 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 SCARNA15-201ENST00000607520 4325 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 AL121657.1-201ENST00000327215 531 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 Y_RNA.194-201ENST00000363985 102 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.74□□□□□ -1.65
SUMO3P55854 ENSAP1-201ENST00000392855 326 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 MIR1182-201ENST00000408363 97 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 EIF4A1P3-201ENST00000411521 244 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 HMGB1P11-201ENST00000413899 637 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 ATG4AP1-201ENST00000416893 538 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.74□□□□□ -1.65
SUMO3P55854 AC092647.1-201ENST00000420654 287 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 CYCSP46-201ENST00000423569 204 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.74□□□□□ -1.65
SUMO3P55854 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.74□□□□□ -1.65
SUMO3P55854 OR52B5P-201ENST00000435337 951 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 AL831737.1-201ENST00000441288 271 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.74□□□□□ -1.65
SUMO3P55854 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.74□□□□□ -1.65
SUMO3P55854 BMI1P1-201ENST00000445879 941 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.74□□□□□ -1.65
SUMO3P55854 PRPF38AP1-201ENST00000451976 933 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.74□□□□□ -1.65
SUMO3P55854 RN7SL172P-201ENST00000460535 303 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 AC097173.1-201ENST00000505862 819 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.74□□□□□ -1.65
SUMO3P55854 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.74□□□□□ -1.65
SUMO3P55854 MTND5P4-201ENST00000514978 288 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.74□□□□□ -1.65
SUMO3P55854 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.74□□□□□ -1.65
SUMO3P55854 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.74□□□□□ -1.65
SUMO3P55854 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.74□□□□□ -1.65
SUMO3P55854 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.74□□□□□ -1.65
SUMO3P55854 RFPL1S-203ENST00000539579 330 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.74□□□□□ -1.65
SUMO3P55854 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.74□□□□□ -1.65
SUMO3P55854 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.74□□□□□ -1.65
SUMO3P55854 GTF2IP22-201ENST00000554443 182 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 AC068446.3-201ENST00000555285 382 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 AC040958.1-201ENST00000561102 201 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.74□□□□□ -1.65
SUMO3P55854 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.74□□□□□ -1.65
SUMO3P55854 AC022884.2-201ENST00000578535 580 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 PRPF19P1-201ENST00000584766 898 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 AC067852.4-201ENST00000590314 478 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms