Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC007224.1-201ENST00000564410 144 ntBASIC4.01□□□□□ -1.77
CDH6P55285 MIR486-1-201ENST00000612171 68 ntBASIC4.01□□□□□ -1.77
CDH6P55285 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH6P55285 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
CDH6P55285 CR392039.4-201ENST00000624968 501 ntBASIC4.01□□□□□ -1.77
CDH6P55285 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH6P55285 RNA5SP196-201ENST00000625967 102 ntBASIC4.01□□□□□ -1.77
CDH6P55285 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH6P55285 AC090229.1-201ENST00000590983 1609 ntBASIC4.01□□□□□ -1.77
CDH6P55285 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH6P55285 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH6P55285 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDH6P55285 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDH6P55285 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4□□□□□ -1.77
CDH6P55285 IQCB2P-201ENST00000401788 1633 ntBASIC4□□□□□ -1.77
CDH6P55285 AL031985.3-201ENST00000565390 2449 ntBASIC4□□□□□ -1.77
CDH6P55285 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4□□□□□ -1.77
CDH6P55285 MIR199A2-201ENST00000385289 110 ntBASIC4□□□□□ -1.77
CDH6P55285 PPIAP31-201ENST00000405422 495 ntBASIC4□□□□□ -1.77
CDH6P55285 MIR1183-201ENST00000408856 89 ntBASIC4□□□□□ -1.77
CDH6P55285 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4□□□□□ -1.77
CDH6P55285 AC093698.1-201ENST00000423843 571 ntBASIC4□□□□□ -1.77
CDH6P55285 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4□□□□□ -1.77
CDH6P55285 AF228730.2-201ENST00000438784 848 ntBASIC4□□□□□ -1.77
CDH6P55285 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4□□□□□ -1.77
CDH6P55285 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4□□□□□ -1.77
CDH6P55285 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4□□□□□ -1.77
CDH6P55285 NUTF2P7-201ENST00000453086 375 ntBASIC4□□□□□ -1.77
CDH6P55285 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4□□□□□ -1.77
CDH6P55285 HMGB1P3-201ENST00000502802 616 ntBASIC4□□□□□ -1.77
CDH6P55285 AC004069.2-201ENST00000505438 1114 ntBASIC4□□□□□ -1.77
CDH6P55285 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4□□□□□ -1.77
CDH6P55285 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4□□□□□ -1.77
CDH6P55285 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4□□□□□ -1.77
CDH6P55285 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4□□□□□ -1.77
CDH6P55285 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CDH6P55285 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
CDH6P55285 AC106785.3-201ENST00000564064 847 ntBASIC4□□□□□ -1.77
CDH6P55285 AL360157.1-201ENST00000565962 87 ntBASIC4□□□□□ -1.77
CDH6P55285 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4□□□□□ -1.77
CDH6P55285 EIF1P6-201ENST00000600054 334 ntBASIC4□□□□□ -1.77
CDH6P55285 AC015726.1-201ENST00000602353 681 ntBASIC4□□□□□ -1.77
CDH6P55285 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4□□□□□ -1.77
CDH6P55285 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4□□□□□ -1.77
CDH6P55285 AL713922.2-201ENST00000619384 716 ntBASIC4□□□□□ -1.77
CDH6P55285 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4□□□□□ -1.77
CDH6P55285 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4□□□□□ -1.77
CDH6P55285 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDH6P55285 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
CDH6P55285 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4□□□□□ -1.77
CDH6P55285 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
CDH6P55285 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4□□□□□ -1.77
CDH6P55285 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
CDH6P55285 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH6P55285 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH6P55285 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH6P55285 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH6P55285 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH6P55285 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH6P55285 MFSD8-220ENST00000641243 1422 ntBASIC3.99□□□□□ -1.77
CDH6P55285 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH6P55285 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
CDH6P55285 RN7SKP227-201ENST00000364445 330 ntBASIC3.99□□□□□ -1.77
CDH6P55285 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH6P55285 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH6P55285 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH6P55285 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH6P55285 RNU6-628P-201ENST00000410675 107 ntBASIC3.99□□□□□ -1.77
CDH6P55285 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH6P55285 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH6P55285 SAGE2P-201ENST00000420011 2126 ntBASIC3.99□□□□□ -1.77
CDH6P55285 OR8F1P-201ENST00000425243 930 ntBASIC3.99□□□□□ -1.77
CDH6P55285 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH6P55285 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH6P55285 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH6P55285 Z74696.2-201ENST00000436514 498 ntBASIC3.99□□□□□ -1.77
CDH6P55285 MED6P1-201ENST00000439659 713 ntBASIC3.99□□□□□ -1.77
CDH6P55285 AC092809.1-201ENST00000441469 474 ntBASIC3.99□□□□□ -1.77
CDH6P55285 MTND2P8-201ENST00000450555 1025 ntBASIC3.99□□□□□ -1.77
CDH6P55285 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH6P55285 TRBV12-2-201ENST00000489763 344 ntBASIC3.99□□□□□ -1.77
CDH6P55285 SUMO1P1-201ENST00000497904 306 ntBASIC3.99□□□□□ -1.77
CDH6P55285 BTF3L4P4-201ENST00000506381 449 ntBASIC3.99□□□□□ -1.77
CDH6P55285 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.99□□□□□ -1.77
CDH6P55285 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH6P55285 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH6P55285 AL161713.1-201ENST00000555538 145 ntBASIC3.99□□□□□ -1.77
CDH6P55285 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.99□□□□□ -1.77
CDH6P55285 AGGF1P6-201ENST00000569213 976 ntBASIC3.99□□□□□ -1.77
CDH6P55285 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH6P55285 AC020910.2-201ENST00000603635 610 ntBASIC3.99□□□□□ -1.77
CDH6P55285 AL390816.3-201ENST00000604527 1066 ntBASIC3.99□□□□□ -1.77
CDH6P55285 AL353743.4-201ENST00000422653 1547 ntBASIC3.99□□□□□ -1.77
CDH6P55285 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH6P55285 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH6P55285 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH6P55285 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH6P55285 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH6P55285 AC006042.3-201ENST00000454684 1469 ntBASIC3.98□□□□□ -1.77
CDH6P55285 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms