Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL591424.2-201ENST00000617023 128 ntBASIC4.04□□□□□ -1.76
CDH4P55283 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDH4P55283 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDH4P55283 AC007529.1-201ENST00000418574 2178 ntBASIC4.03□□□□□ -1.76
CDH4P55283 AC090229.1-201ENST00000590983 1609 ntBASIC4.03□□□□□ -1.76
CDH4P55283 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH4P55283 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH4P55283 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDH4P55283 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDH4P55283 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH4P55283 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH4P55283 MIR513A2-201ENST00000385249 127 ntBASIC4.03□□□□□ -1.76
CDH4P55283 Z86062.1-201ENST00000406773 777 ntBASIC4.03□□□□□ -1.76
CDH4P55283 AC010385.1-201ENST00000412374 256 ntBASIC4.03□□□□□ -1.76
CDH4P55283 RPL7P2-201ENST00000427639 268 ntBASIC4.03□□□□□ -1.76
CDH4P55283 ELOCP18-201ENST00000434209 337 ntBASIC4.03□□□□□ -1.76
CDH4P55283 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH4P55283 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH4P55283 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH4P55283 OR9M1P-201ENST00000459641 921 ntBASIC4.03□□□□□ -1.76
CDH4P55283 RPL30P11-201ENST00000495304 339 ntBASIC4.03□□□□□ -1.76
CDH4P55283 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH4P55283 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH4P55283 RNU6-751P-201ENST00000516382 101 ntBASIC4.03□□□□□ -1.76
CDH4P55283 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH4P55283 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH4P55283 AP002812.4-201ENST00000532139 286 ntBASIC4.03□□□□□ -1.76
CDH4P55283 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.03□□□□□ -1.76
CDH4P55283 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH4P55283 AL161713.1-201ENST00000555538 145 ntBASIC4.03□□□□□ -1.76
CDH4P55283 OR1AB1P-201ENST00000585564 761 ntBASIC4.03□□□□□ -1.76
CDH4P55283 AC093227.2-201ENST00000589357 285 ntBASIC4.03□□□□□ -1.76
CDH4P55283 AC008638.3-201ENST00000603341 463 ntBASIC4.03□□□□□ -1.76
CDH4P55283 AC128687.2-201ENST00000609657 566 ntBASIC4.03□□□□□ -1.76
CDH4P55283 AC016911.1-201ENST00000613297 452 ntBASIC4.03□□□□□ -1.76
CDH4P55283 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH4P55283 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH4P55283 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH4P55283 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH4P55283 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH4P55283 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDH4P55283 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH4P55283 GTF2H2B-203ENST00000508065 1432 ntBASIC4.03□□□□□ -1.76
CDH4P55283 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.77
CDH4P55283 FAM91A3P-201ENST00000456826 2544 ntBASIC4.02□□□□□ -1.77
CDH4P55283 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH4P55283 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.02□□□□□ -1.77
CDH4P55283 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH4P55283 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH4P55283 Y_RNA.126-201ENST00000363382 111 ntBASIC4.02□□□□□ -1.77
CDH4P55283 RNU1-64P-201ENST00000365443 163 ntBASIC4.02□□□□□ -1.77
CDH4P55283 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH4P55283 AL031736.2-201ENST00000426573 787 ntBASIC4.02□□□□□ -1.77
CDH4P55283 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH4P55283 RPL7P28-201ENST00000437739 740 ntBASIC4.02□□□□□ -1.77
CDH4P55283 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH4P55283 RANP8-201ENST00000444720 713 ntBASIC4.02□□□□□ -1.77
CDH4P55283 TPTE2P6-202ENST00000445572 1007 ntBASIC4.02□□□□□ -1.77
CDH4P55283 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH4P55283 AC025459.1-201ENST00000504072 156 ntBASIC4.02□□□□□ -1.77
CDH4P55283 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH4P55283 AC026402.1-201ENST00000513642 170 ntBASIC4.02□□□□□ -1.77
CDH4P55283 IGHV3-32-201ENST00000519182 355 ntBASIC4.02□□□□□ -1.77
CDH4P55283 OR4A12P-201ENST00000530847 918 ntBASIC4.02□□□□□ -1.77
CDH4P55283 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH4P55283 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH4P55283 NOP56P3-201ENST00000549457 385 ntBASIC4.02□□□□□ -1.77
CDH4P55283 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH4P55283 AL109741.3-201ENST00000561748 592 ntBASIC4.02□□□□□ -1.77
CDH4P55283 AC106785.1-201ENST00000565935 262 ntBASIC4.02□□□□□ -1.77
CDH4P55283 MTND4LP24-201ENST00000572277 291 ntBASIC4.02□□□□□ -1.77
CDH4P55283 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.02□□□□□ -1.77
CDH4P55283 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.02□□□□□ -1.77
CDH4P55283 VN1R79P-201ENST00000593540 513 ntBASIC4.02□□□□□ -1.77
CDH4P55283 AC015726.1-201ENST00000602353 681 ntBASIC4.02□□□□□ -1.77
CDH4P55283 AC242628.1-201ENST00000606810 391 ntBASIC4.02□□□□□ -1.77
CDH4P55283 AC090912.3-201ENST00000609775 533 ntBASIC4.02□□□□□ -1.77
CDH4P55283 AL354798.1-201ENST00000622505 329 ntBASIC4.02□□□□□ -1.77
CDH4P55283 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH4P55283 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH4P55283 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH4P55283 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH4P55283 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH4P55283 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH4P55283 AL031985.3-201ENST00000565390 2449 ntBASIC4.02□□□□□ -1.77
CDH4P55283 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH4P55283 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH4P55283 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDH4P55283 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH4P55283 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CDH4P55283 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH4P55283 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH4P55283 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH4P55283 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH4P55283 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH4P55283 AC083799.1-201ENST00000366451 910 ntBASIC4.01□□□□□ -1.77
CDH4P55283 AL590290.1-201ENST00000405336 380 ntBASIC4.01□□□□□ -1.77
CDH4P55283 AL445189.1-201ENST00000405722 338 ntBASIC4.01□□□□□ -1.77
CDH4P55283 TCEA1P4-201ENST00000415066 844 ntBASIC4.01□□□□□ -1.77
CDH4P55283 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms