Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.64□□□□□ -1.51
EPHB3P54753 SNRPCP3-201ENST00000474888 476 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 RPS29P25-201ENST00000481709 171 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.64□□□□□ -1.51
EPHB3P54753 DYNLL1P6-201ENST00000503440 264 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.64□□□□□ -1.51
EPHB3P54753 LRRC34P2-201ENST00000514850 553 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.64□□□□□ -1.51
EPHB3P54753 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.64□□□□□ -1.51
EPHB3P54753 RNU6-430P-201ENST00000517078 107 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.64□□□□□ -1.51
EPHB3P54753 MTCO2P4-201ENST00000517968 247 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.64□□□□□ -1.51
EPHB3P54753 AP001893.2-201ENST00000526949 202 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AP002748.2-201ENST00000528671 348 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AC125611.2-201ENST00000551907 647 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AC127381.1-201ENST00000555979 939 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.64□□□□□ -1.51
EPHB3P54753 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.64□□□□□ -1.51
EPHB3P54753 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.64□□□□□ -1.51
EPHB3P54753 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.64□□□□□ -1.51
EPHB3P54753 HMGB1P33-201ENST00000563485 527 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AC114947.2-201ENST00000565748 2125 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 MIR3913-1-201ENST00000577744 102 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.64□□□□□ -1.51
EPHB3P54753 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.64□□□□□ -1.51
EPHB3P54753 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.64□□□□□ -1.51
EPHB3P54753 AC006116.3-201ENST00000592968 361 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
EPHB3P54753 KC877982.1-201ENST00000602313 470 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AL161729.4-201ENST00000604650 476 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AL121655.1-201ENST00000605811 308 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AC019193.2-201ENST00000610012 634 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AL139089.1-201ENST00000620372 975 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AP002799.1-201ENST00000623552 423 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.64□□□□□ -1.51
EPHB3P54753 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EPHB3P54753 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.64□□□□□ -1.51
EPHB3P54753 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EPHB3P54753 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
EPHB3P54753 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
EPHB3P54753 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
EPHB3P54753 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.64□□□□□ -1.51
EPHB3P54753 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.64□□□□□ -1.51
EPHB3P54753 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EPHB3P54753 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
EPHB3P54753 AC104964.3-201ENST00000606115 2860 ntBASIC5.64□□□□□ -1.51
EPHB3P54753 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
EPHB3P54753 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
EPHB3P54753 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
EPHB3P54753 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.64□□□□□ -1.51
EPHB3P54753 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
EPHB3P54753 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.63□□□□□ -1.51
EPHB3P54753 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
EPHB3P54753 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.63□□□□□ -1.51
EPHB3P54753 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
EPHB3P54753 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.63□□□□□ -1.51
EPHB3P54753 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
EPHB3P54753 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.63□□□□□ -1.51
EPHB3P54753 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
EPHB3P54753 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
EPHB3P54753 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
EPHB3P54753 Y_RNA.279-201ENST00000364763 95 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
EPHB3P54753 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
EPHB3P54753 Y_RNA.460-201ENST00000384255 102 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 RNU1-106P-201ENST00000384382 164 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
EPHB3P54753 RN7SKP126-201ENST00000411143 300 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.63□□□□□ -1.51
EPHB3P54753 AC013404.1-201ENST00000413068 249 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.63□□□□□ -1.51
EPHB3P54753 USP9YP13-201ENST00000417797 480 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
EPHB3P54753 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.63□□□□□ -1.51
EPHB3P54753 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.63□□□□□ -1.51
EPHB3P54753 LINC02210-201ENST00000444561 288 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 AC073850.1-201ENST00000449243 255 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 Z92846.1-201ENST00000456203 268 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 PMCHL2-203ENST00000457791 237 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.63□□□□□ -1.51
EPHB3P54753 RPS23P1-201ENST00000491662 432 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.63□□□□□ -1.51
EPHB3P54753 RNU6-1308P-201ENST00000516817 103 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.63□□□□□ -1.51
EPHB3P54753 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.63□□□□□ -1.51
EPHB3P54753 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.63□□□□□ -1.51
EPHB3P54753 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.63□□□□□ -1.51
EPHB3P54753 MIR4646-201ENST00000580775 63 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
EPHB3P54753 AL359535.1-201ENST00000612100 1087 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.63□□□□□ -1.51
EPHB3P54753 AC073348.1-201ENST00000623002 331 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.63□□□□□ -1.51
EPHB3P54753 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
EPHB3P54753 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
EPHB3P54753 DCAF13P3-201ENST00000561147 1334 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
EPHB3P54753 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms