Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 HMGB3P13-201ENST00000511263 607 ntBASIC4.32□□□□□ -1.72
ATXN3P54252 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATXN3P54252 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.32□□□□□ -1.72
ATXN3P54252 MYL12AP1-201ENST00000518490 515 ntBASIC4.32□□□□□ -1.72
ATXN3P54252 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.32□□□□□ -1.72
ATXN3P54252 AC010306.1-201ENST00000523223 1117 ntBASIC4.32□□□□□ -1.72
ATXN3P54252 AC105233.3-201ENST00000531125 744 ntBASIC4.32□□□□□ -1.72
ATXN3P54252 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.32□□□□□ -1.72
ATXN3P54252 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.32□□□□□ -1.72
ATXN3P54252 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.32□□□□□ -1.72
ATXN3P54252 AC053481.4-201ENST00000583164 216 ntBASIC4.32□□□□□ -1.72
ATXN3P54252 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.32□□□□□ -1.72
ATXN3P54252 AC008638.3-201ENST00000603341 463 ntBASIC4.32□□□□□ -1.72
ATXN3P54252 AC079587.1-201ENST00000603846 277 ntBASIC4.32□□□□□ -1.72
ATXN3P54252 KATNBL1P5-201ENST00000605015 517 ntBASIC4.32□□□□□ -1.72
ATXN3P54252 AP003117.2-201ENST00000606010 545 ntBASIC4.32□□□□□ -1.72
ATXN3P54252 AP002360.3-201ENST00000607673 710 ntBASIC4.32□□□□□ -1.72
ATXN3P54252 AL118556.2-201ENST00000614375 824 ntBASIC4.32□□□□□ -1.72
ATXN3P54252 MIR6864-201ENST00000617935 70 ntBASIC4.32□□□□□ -1.72
ATXN3P54252 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATXN3P54252 ERCC6-202ENST00000374127 1782 ntBASIC4.32□□□□□ -1.72
ATXN3P54252 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.32□□□□□ -1.72
ATXN3P54252 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATXN3P54252 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATXN3P54252 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATXN3P54252 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.31□□□□□ -1.72
ATXN3P54252 PNPT1P2-201ENST00000456768 2050 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 KPNA2P2-201ENST00000419546 1489 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATXN3P54252 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ATXN3P54252 ZNF33CP-201ENST00000432492 2030 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.31□□□□□ -1.72
ATXN3P54252 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ATXN3P54252 MIR448-201ENST00000362131 111 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 MIR124-3-201ENST00000384866 87 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 FCF1P5-201ENST00000406490 482 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 PNRC2P1-201ENST00000423940 420 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 MTCO1P54-201ENST00000430139 712 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 AC005189.1-201ENST00000431286 310 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.31□□□□□ -1.72
ATXN3P54252 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.31□□□□□ -1.72
ATXN3P54252 RPS27AP13-201ENST00000498403 237 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.31□□□□□ -1.72
ATXN3P54252 KCTD9P2-201ENST00000512203 1013 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.31□□□□□ -1.72
ATXN3P54252 SNRPGP1-201ENST00000553864 222 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 AC027104.1-201ENST00000563702 681 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.31□□□□□ -1.72
ATXN3P54252 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATXN3P54252 AC125494.3-201ENST00000602759 455 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 AC090181.2-201ENST00000602975 672 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 AC010201.1-201ENST00000605051 540 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.31□□□□□ -1.72
ATXN3P54252 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATXN3P54252 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.31□□□□□ -1.72
ATXN3P54252 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATXN3P54252 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
ATXN3P54252 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ATXN3P54252 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.31□□□□□ -1.72
ATXN3P54252 AC119744.1-201ENST00000454746 1715 ntBASIC4.31□□□□□ -1.72
ATXN3P54252 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATXN3P54252 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
ATXN3P54252 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.31□□□□□ -1.72
ATXN3P54252 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATXN3P54252 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.31□□□□□ -1.72
ATXN3P54252 MTCO1P18-201ENST00000455518 1419 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
ATXN3P54252 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATXN3P54252 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
ATXN3P54252 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATXN3P54252 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.3□□□□□ -1.72
ATXN3P54252 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
ATXN3P54252 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.3□□□□□ -1.72
ATXN3P54252 RPL21P65-201ENST00000406094 466 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 AL160275.2-201ENST00000412010 394 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 AC004987.3-201ENST00000413879 771 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 AL356095.1-201ENST00000417217 199 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 RPL31P45-201ENST00000419532 356 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.3□□□□□ -1.72
ATXN3P54252 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.3□□□□□ -1.72
ATXN3P54252 CDY14P-201ENST00000431260 1014 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.3□□□□□ -1.72
ATXN3P54252 CDY12P-201ENST00000440679 1015 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ATXN3P54252 CDY13P-201ENST00000445813 1015 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 CDY23P-201ENST00000451661 1014 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.3□□□□□ -1.72
ATXN3P54252 VN1R105P-201ENST00000486595 910 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.3□□□□□ -1.72
ATXN3P54252 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 NPM1P41-201ENST00000512920 831 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.3□□□□□ -1.72
ATXN3P54252 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.3□□□□□ -1.72
ATXN3P54252 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.3□□□□□ -1.72
ATXN3P54252 IFITM8P-201ENST00000522529 394 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 OR5BC1P-201ENST00000529327 739 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 TRAV8-5-201ENST00000537369 341 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 AC074029.1-201ENST00000552531 1044 ntBASIC4.3□□□□□ -1.72
ATXN3P54252 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.3□□□□□ -1.72
ATXN3P54252 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms