Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLTCL1P53675 AL732372.2-225ENST00000642124 456 ntBASIC4.97□□□□□ -1.61
CLTCL1P53675 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLTCL1P53675 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLTCL1P53675 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLTCL1P53675 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.96□□□□□ -1.61
CLTCL1P53675 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLTCL1P53675 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLTCL1P53675 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLTCL1P53675 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.96□□□□□ -1.62
CLTCL1P53675 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.96□□□□□ -1.62
CLTCL1P53675 RPS20P1-201ENST00000434853 354 ntBASIC4.96□□□□□ -1.62
CLTCL1P53675 AL049873.1-201ENST00000480540 376 ntBASIC4.96□□□□□ -1.62
CLTCL1P53675 AC069499.1-201ENST00000489433 509 ntBASIC4.96□□□□□ -1.62
CLTCL1P53675 HIGD1AP18-201ENST00000520730 278 ntBASIC4.96□□□□□ -1.62
CLTCL1P53675 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.96□□□□□ -1.62
CLTCL1P53675 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.96□□□□□ -1.62
CLTCL1P53675 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.96□□□□□ -1.62
CLTCL1P53675 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLTCL1P53675 AC118273.1-201ENST00000525324 3006 ntBASIC4.96□□□□□ -1.62
CLTCL1P53675 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLTCL1P53675 OR4K6P-201ENST00000416478 897 ntBASIC4.95□□□□□ -1.62
CLTCL1P53675 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.95□□□□□ -1.62
CLTCL1P53675 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.95□□□□□ -1.62
CLTCL1P53675 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.95□□□□□ -1.62
CLTCL1P53675 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.95□□□□□ -1.62
CLTCL1P53675 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.95□□□□□ -1.62
CLTCL1P53675 RN7SL807P-201ENST00000470923 297 ntBASIC4.95□□□□□ -1.62
CLTCL1P53675 AC005798.1-201ENST00000513715 387 ntBASIC4.95□□□□□ -1.62
CLTCL1P53675 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.95□□□□□ -1.62
CLTCL1P53675 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.95□□□□□ -1.62
CLTCL1P53675 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.95□□□□□ -1.62
CLTCL1P53675 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.95□□□□□ -1.62
CLTCL1P53675 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CLTCL1P53675 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLTCL1P53675 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
CLTCL1P53675 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLTCL1P53675 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.94□□□□□ -1.62
CLTCL1P53675 RNU1-18P-201ENST00000363062 164 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 RNA5SP322-201ENST00000363617 119 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 RNA5SP229-201ENST00000410809 99 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 AL671855.1-201ENST00000446875 1203 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 MTND6P6-201ENST00000478031 263 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 HMGB1P21-201ENST00000502313 581 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 AC112198.1-201ENST00000505369 1220 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.94□□□□□ -1.62
CLTCL1P53675 AC011611.1-201ENST00000552179 197 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 AC092868.3-201ENST00000560515 784 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.94□□□□□ -1.62
CLTCL1P53675 AC009464.1-201ENST00000615731 469 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 AC083843.2-201ENST00000568248 6253 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLTCL1P53675 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CLTCL1P53675 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLTCL1P53675 OTUD4P1-201ENST00000237841 3067 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CLTCL1P53675 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLTCL1P53675 RNU1-70P-201ENST00000362618 164 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.94□□□□□ -1.62
CLTCL1P53675 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLTCL1P53675 ANP32BP2-201ENST00000454525 545 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 RPL32P34-201ENST00000486380 400 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.94□□□□□ -1.62
CLTCL1P53675 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.94□□□□□ -1.62
CLTCL1P53675 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLTCL1P53675 AC024023.1-201ENST00000624530 922 ntBASIC4.94□□□□□ -1.62
CLTCL1P53675 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLTCL1P53675 LINC02471-203ENST00000641941 4752 ntBASIC4.93□□□□□ -1.62
CLTCL1P53675 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLTCL1P53675 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.93□□□□□ -1.62
CLTCL1P53675 RNU6-283P-201ENST00000364788 107 ntBASIC4.93□□□□□ -1.62
CLTCL1P53675 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLTCL1P53675 MTND4P22-201ENST00000413116 1169 ntBASIC4.93□□□□□ -1.62
CLTCL1P53675 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.93□□□□□ -1.62
CLTCL1P53675 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.93□□□□□ -1.62
CLTCL1P53675 AC074367.1-201ENST00000438685 1125 ntBASIC4.93□□□□□ -1.62
CLTCL1P53675 AL356535.1-201ENST00000440335 398 ntBASIC4.93□□□□□ -1.62
CLTCL1P53675 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.93□□□□□ -1.62
CLTCL1P53675 RN7SL504P-201ENST00000494496 287 ntBASIC4.93□□□□□ -1.62
CLTCL1P53675 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.93□□□□□ -1.62
CLTCL1P53675 MIR4433B-201ENST00000581329 102 ntBASIC4.93□□□□□ -1.62
CLTCL1P53675 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.93□□□□□ -1.62
CLTCL1P53675 AC124312.4-201ENST00000605533 310 ntBASIC4.93□□□□□ -1.62
CLTCL1P53675 AC073657.2-201ENST00000605661 303 ntBASIC4.93□□□□□ -1.62
CLTCL1P53675 AL513477.2-201ENST00000607858 568 ntBASIC4.93□□□□□ -1.62
CLTCL1P53675 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.93□□□□□ -1.62
CLTCL1P53675 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
CLTCL1P53675 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLTCL1P53675 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.93□□□□□ -1.62
CLTCL1P53675 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CLTCL1P53675 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.92□□□□□ -1.62
CLTCL1P53675 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.92□□□□□ -1.62
CLTCL1P53675 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CLTCL1P53675 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CLTCL1P53675 AL031595.2-201ENST00000624215 19071 ntBASIC4.92□□□□□ -1.62
CLTCL1P53675 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLTCL1P53675 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
CLTCL1P53675 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLTCL1P53675 SNORA48.5-201ENST00000391143 135 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms