Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 HMGN1P30-201ENST00000589286 268 ntBASIC6.05□□□□□ -1.44
LIG3P49916 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.05□□□□□ -1.44
LIG3P49916 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.05□□□□□ -1.44
LIG3P49916 CKS1BP3-201ENST00000600888 237 ntBASIC6.05□□□□□ -1.44
LIG3P49916 C8orf59P2-201ENST00000603441 271 ntBASIC6.05□□□□□ -1.44
LIG3P49916 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIG3P49916 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIG3P49916 AL096712.1-201ENST00000614561 159 ntBASIC6.05□□□□□ -1.44
LIG3P49916 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.05□□□□□ -1.44
LIG3P49916 MIR1321-201ENST00000637766 79 ntBASIC6.05□□□□□ -1.44
LIG3P49916 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.05□□□□□ -1.44
LIG3P49916 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LIG3P49916 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
LIG3P49916 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
LIG3P49916 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIG3P49916 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIG3P49916 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
LIG3P49916 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.04□□□□□ -1.44
LIG3P49916 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.04□□□□□ -1.44
LIG3P49916 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIG3P49916 AL137141.1-201ENST00000624622 4836 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.04□□□□□ -1.44
LIG3P49916 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIG3P49916 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIG3P49916 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIG3P49916 OR9K1P-201ENST00000326513 941 ntBASIC6.04□□□□□ -1.44
LIG3P49916 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LIG3P49916 RNA5SP273-201ENST00000362484 113 ntBASIC6.04□□□□□ -1.44
LIG3P49916 Y_RNA.813-201ENST00000364639 102 ntBASIC6.04□□□□□ -1.44
LIG3P49916 RN7SKP15-201ENST00000364742 309 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.04□□□□□ -1.44
LIG3P49916 RNU6-877P-201ENST00000383868 107 ntBASIC6.04□□□□□ -1.44
LIG3P49916 SNRPEP6-201ENST00000407465 277 ntBASIC6.04□□□□□ -1.44
LIG3P49916 MTCO1P17-201ENST00000411522 491 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AL357752.1-201ENST00000412817 349 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.04□□□□□ -1.44
LIG3P49916 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.04□□□□□ -1.44
LIG3P49916 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC6.04□□□□□ -1.44
LIG3P49916 RPS3AP54-201ENST00000435535 734 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.04□□□□□ -1.44
LIG3P49916 RPL12P11-201ENST00000439970 501 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC6.04□□□□□ -1.44
LIG3P49916 RPL17P49-201ENST00000443728 411 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AL162739.1-201ENST00000450606 307 ntBASIC6.04□□□□□ -1.44
LIG3P49916 HLA-DPA3-207ENST00000454398 229 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.04□□□□□ -1.44
LIG3P49916 AMD1P1-201ENST00000457220 922 ntBASIC6.04□□□□□ -1.44
LIG3P49916 RPL38P1-201ENST00000460914 211 ntBASIC6.04□□□□□ -1.44
LIG3P49916 RN7SL352P-201ENST00000466002 277 ntBASIC6.04□□□□□ -1.44
LIG3P49916 RPL7P22-201ENST00000466005 733 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AC007182.2-201ENST00000489251 402 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AC083795.1-201ENST00000491760 320 ntBASIC6.04□□□□□ -1.44
LIG3P49916 MTCYBP18-201ENST00000501056 747 ntBASIC6.04□□□□□ -1.44
LIG3P49916 GLUD1P3-202ENST00000508551 200 ntBASIC6.04□□□□□ -1.44
LIG3P49916 Y_RNA.667-201ENST00000516212 107 ntBASIC6.04□□□□□ -1.44
LIG3P49916 RNU6-875P-201ENST00000516488 106 ntBASIC6.04□□□□□ -1.44
LIG3P49916 Y_RNA.704-201ENST00000516851 102 ntBASIC6.04□□□□□ -1.44
LIG3P49916 FTH1P11-201ENST00000517577 551 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AC060775.1-201ENST00000518241 520 ntBASIC6.04□□□□□ -1.44
LIG3P49916 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
LIG3P49916 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.04□□□□□ -1.44
LIG3P49916 MTND1P35-201ENST00000526739 508 ntBASIC6.04□□□□□ -1.44
LIG3P49916 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC6.04□□□□□ -1.44
LIG3P49916 OR5M2P-201ENST00000529003 936 ntBASIC6.04□□□□□ -1.44
LIG3P49916 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LIG3P49916 AL512360.1-201ENST00000555346 234 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AL845331.3-202ENST00000562856 261 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AC034268.2-201ENST00000571784 482 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AC011840.5-201ENST00000582125 771 ntBASIC6.04□□□□□ -1.44
LIG3P49916 MIR4310-201ENST00000582950 57 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.04□□□□□ -1.44
LIG3P49916 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.04□□□□□ -1.44
LIG3P49916 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.04□□□□□ -1.44
LIG3P49916 AL158211.4-201ENST00000606988 584 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AC015982.1-201ENST00000608113 465 ntBASIC6.04□□□□□ -1.44
LIG3P49916 MIR6809-201ENST00000612189 116 ntBASIC6.04□□□□□ -1.44
LIG3P49916 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.04□□□□□ -1.44
LIG3P49916 AP003122.6-201ENST00000623831 495 ntBASIC6.04□□□□□ -1.44
LIG3P49916 U6.101-201ENST00000637707 76 ntBASIC6.04□□□□□ -1.44
LIG3P49916 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIG3P49916 RBPJP7-201ENST00000442803 1447 ntBASIC6.04□□□□□ -1.44
LIG3P49916 RBPJP5-201ENST00000449433 1447 ntBASIC6.04□□□□□ -1.44
LIG3P49916 AF287957.1-201ENST00000607368 1595 ntBASIC6.04□□□□□ -1.44
LIG3P49916 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.04□□□□□ -1.44
LIG3P49916 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LIG3P49916 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LIG3P49916 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
LIG3P49916 AC107081.3-201ENST00000612715 2034 ntBASIC6.04□□□□□ -1.44
LIG3P49916 GNL2P1-201ENST00000451274 2190 ntBASIC6.04□□□□□ -1.44
LIG3P49916 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
LIG3P49916 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIG3P49916 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIG3P49916 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
LIG3P49916 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIG3P49916 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIG3P49916 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LIG3P49916 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.04□□□□□ -1.44
LIG3P49916 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
LIG3P49916 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.03□□□□□ -1.44
LIG3P49916 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms