Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC010460.2-201ENST00000509054 677 ntBASIC4.33□□□□□ -1.72
HNF4AP41235 KRT19P6-201ENST00000510983 209 ntBASIC4.33□□□□□ -1.72
HNF4AP41235 AC016065.2-201ENST00000514530 444 ntBASIC4.33□□□□□ -1.72
HNF4AP41235 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.33□□□□□ -1.72
HNF4AP41235 HMGB1P1-201ENST00000522557 636 ntBASIC4.33□□□□□ -1.72
HNF4AP41235 AC090281.1-201ENST00000523019 276 ntBASIC4.33□□□□□ -1.72
HNF4AP41235 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.33□□□□□ -1.72
HNF4AP41235 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.33□□□□□ -1.72
HNF4AP41235 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HNF4AP41235 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.33□□□□□ -1.72
HNF4AP41235 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.33□□□□□ -1.72
HNF4AP41235 MIR4504-201ENST00000577413 92 ntBASIC4.33□□□□□ -1.72
HNF4AP41235 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.33□□□□□ -1.72
HNF4AP41235 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HNF4AP41235 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.33□□□□□ -1.72
HNF4AP41235 AC010201.1-201ENST00000605051 540 ntBASIC4.33□□□□□ -1.72
HNF4AP41235 AC020634.1-201ENST00000608701 549 ntBASIC4.33□□□□□ -1.72
HNF4AP41235 AC078899.5-201ENST00000612475 178 ntBASIC4.33□□□□□ -1.72
HNF4AP41235 AL133243.1-201ENST00000614487 366 ntBASIC4.33□□□□□ -1.72
HNF4AP41235 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.33□□□□□ -1.72
HNF4AP41235 AC090506.2-201ENST00000624521 419 ntBASIC4.33□□□□□ -1.72
HNF4AP41235 AP003485.1-201ENST00000625093 753 ntBASIC4.33□□□□□ -1.72
HNF4AP41235 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.33□□□□□ -1.72
HNF4AP41235 AL445984.1-201ENST00000637834 659 ntBASIC4.33□□□□□ -1.72
HNF4AP41235 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HNF4AP41235 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HNF4AP41235 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
HNF4AP41235 AC010300.1-201ENST00000600671 5134 ntBASIC4.33□□□□□ -1.72
HNF4AP41235 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.33□□□□□ -1.72
HNF4AP41235 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.33□□□□□ -1.72
HNF4AP41235 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HNF4AP41235 AL132640.2-201ENST00000559968 1698 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HNF4AP41235 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HNF4AP41235 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
HNF4AP41235 AL122126.1-201ENST00000546905 1318 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 RNU6-1243P-201ENST00000364028 107 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 MIR3074-201ENST00000384885 81 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HNF4AP41235 SNORA74C-2-201ENST00000411179 201 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 AL445183.3-201ENST00000414168 502 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 AL590139.1-201ENST00000416267 400 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 AC119751.6-201ENST00000416712 186 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.32□□□□□ -1.72
HNF4AP41235 UQCRBP1-201ENST00000421129 336 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.32□□□□□ -1.72
HNF4AP41235 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.32□□□□□ -1.72
HNF4AP41235 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.32□□□□□ -1.72
HNF4AP41235 RPS26P30-201ENST00000443431 335 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 RPL7P33-201ENST00000444159 742 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 RPL23AP43-201ENST00000446445 471 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 RPS27AP15-201ENST00000447672 466 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.32□□□□□ -1.72
HNF4AP41235 RPS20P32-201ENST00000456044 356 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 RPL21P126-201ENST00000470049 478 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 AP000893.1-201ENST00000474462 794 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 AC078817.1-201ENST00000492623 435 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.32□□□□□ -1.72
HNF4AP41235 AC111000.3-201ENST00000508057 576 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.32□□□□□ -1.72
HNF4AP41235 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HNF4AP41235 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.32□□□□□ -1.72
HNF4AP41235 HIGD1AP3-201ENST00000515857 278 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 RNA5SP154-201ENST00000516193 111 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 RN7SKP92-201ENST00000517266 244 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.32□□□□□ -1.72
HNF4AP41235 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.32□□□□□ -1.72
HNF4AP41235 AP000827.1-201ENST00000527814 258 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HNF4AP41235 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.32□□□□□ -1.72
HNF4AP41235 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.32□□□□□ -1.72
HNF4AP41235 AL121834.1-201ENST00000572284 509 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.32□□□□□ -1.72
HNF4AP41235 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.32□□□□□ -1.72
HNF4AP41235 VN1R79P-201ENST00000593540 513 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.32□□□□□ -1.72
HNF4AP41235 AC027449.1-201ENST00000608890 407 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 AL050303.3-201ENST00000613704 284 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 MIR8084-201ENST00000614105 89 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 VN1R9P-201ENST00000614184 867 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 AC026368.1-201ENST00000614934 690 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 MIR7154-201ENST00000620673 73 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.32□□□□□ -1.72
HNF4AP41235 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.32□□□□□ -1.72
HNF4AP41235 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HNF4AP41235 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HNF4AP41235 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HNF4AP41235 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HNF4AP41235 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.32□□□□□ -1.72
HNF4AP41235 AC073055.1-201ENST00000456901 1621 ntBASIC4.32□□□□□ -1.72
HNF4AP41235 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HNF4AP41235 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.31□□□□□ -1.72
HNF4AP41235 MTCO1P4-201ENST00000520516 1409 ntBASIC4.31□□□□□ -1.72
HNF4AP41235 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HNF4AP41235 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HNF4AP41235 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HNF4AP41235 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.31□□□□□ -1.72
HNF4AP41235 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.31□□□□□ -1.72
HNF4AP41235 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms