Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RFC3P40938 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.7□□□□□ -1.82
RFC3P40938 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.7□□□□□ -1.82
RFC3P40938 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFC3P40938 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.7□□□□□ -1.82
RFC3P40938 AL049870.4-201ENST00000555741 486 ntBASIC3.7□□□□□ -1.82
RFC3P40938 AL109741.3-201ENST00000561748 592 ntBASIC3.7□□□□□ -1.82
RFC3P40938 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.7□□□□□ -1.82
RFC3P40938 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.7□□□□□ -1.82
RFC3P40938 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.7□□□□□ -1.82
RFC3P40938 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.7□□□□□ -1.82
RFC3P40938 VN1R79P-201ENST00000593540 513 ntBASIC3.7□□□□□ -1.82
RFC3P40938 AC090525.3-201ENST00000605601 189 ntBASIC3.7□□□□□ -1.82
RFC3P40938 AC073111.2-201ENST00000605657 1075 ntBASIC3.7□□□□□ -1.82
RFC3P40938 AC012603.1-201ENST00000606424 528 ntBASIC3.7□□□□□ -1.82
RFC3P40938 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFC3P40938 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RFC3P40938 AC015726.3-201ENST00000624501 418 ntBASIC3.7□□□□□ -1.82
RFC3P40938 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
RFC3P40938 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.7□□□□□ -1.82
RFC3P40938 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.7□□□□□ -1.82
RFC3P40938 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RFC3P40938 AC092162.3-201ENST00000624511 1624 ntBASIC3.7□□□□□ -1.82
RFC3P40938 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFC3P40938 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RFC3P40938 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RFC3P40938 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFC3P40938 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.69□□□□□ -1.82
RFC3P40938 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.69□□□□□ -1.82
RFC3P40938 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RFC3P40938 RNF6P1-201ENST00000444889 1784 ntBASIC3.69□□□□□ -1.82
RFC3P40938 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFC3P40938 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
RFC3P40938 SNORA62.3-201ENST00000365110 153 ntBASIC3.69□□□□□ -1.82
RFC3P40938 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.69□□□□□ -1.82
RFC3P40938 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.69□□□□□ -1.82
RFC3P40938 RPL7P53-201ENST00000421245 739 ntBASIC3.69□□□□□ -1.82
RFC3P40938 AL365396.1-201ENST00000430854 671 ntBASIC3.69□□□□□ -1.82
RFC3P40938 MTCO1P57-201ENST00000432182 261 ntBASIC3.69□□□□□ -1.82
RFC3P40938 BMS1P19-201ENST00000433925 393 ntBASIC3.69□□□□□ -1.82
RFC3P40938 RPL23AP89-201ENST00000439324 255 ntBASIC3.69□□□□□ -1.82
RFC3P40938 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.69□□□□□ -1.82
RFC3P40938 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.69□□□□□ -1.82
RFC3P40938 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.69□□□□□ -1.82
RFC3P40938 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.69□□□□□ -1.82
RFC3P40938 AC092691.2-201ENST00000461787 803 ntBASIC3.69□□□□□ -1.82
RFC3P40938 NIPA2P2-201ENST00000496376 1083 ntBASIC3.69□□□□□ -1.82
RFC3P40938 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
RFC3P40938 SLC25A15P5-201ENST00000508033 253 ntBASIC3.69□□□□□ -1.82
RFC3P40938 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.69□□□□□ -1.82
RFC3P40938 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFC3P40938 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.69□□□□□ -1.82
RFC3P40938 USP9YP5-201ENST00000511770 630 ntBASIC3.69□□□□□ -1.82
RFC3P40938 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.69□□□□□ -1.82
RFC3P40938 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.69□□□□□ -1.82
RFC3P40938 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.69□□□□□ -1.82
RFC3P40938 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.69□□□□□ -1.82
RFC3P40938 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.69□□□□□ -1.82
RFC3P40938 MIR548Y-201ENST00000582739 110 ntBASIC3.69□□□□□ -1.82
RFC3P40938 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.69□□□□□ -1.82
RFC3P40938 AP001542.1-201ENST00000591314 200 ntBASIC3.69□□□□□ -1.82
RFC3P40938 MIR92B-201ENST00000607575 96 ntBASIC3.69□□□□□ -1.82
RFC3P40938 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.69□□□□□ -1.82
RFC3P40938 AL392048.1-201ENST00000613946 534 ntBASIC3.69□□□□□ -1.82
RFC3P40938 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.69□□□□□ -1.82
RFC3P40938 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.69□□□□□ -1.82
RFC3P40938 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.69□□□□□ -1.82
RFC3P40938 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFC3P40938 ZNF962P-201ENST00000443465 3140 ntBASIC3.68□□□□□ -1.82
RFC3P40938 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RFC3P40938 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RFC3P40938 AL139811.1-201ENST00000424779 2299 ntBASIC3.68□□□□□ -1.82
RFC3P40938 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
RFC3P40938 RNU6-317P-201ENST00000384031 107 ntBASIC3.68□□□□□ -1.82
RFC3P40938 AL160175.1-201ENST00000428124 247 ntBASIC3.68□□□□□ -1.82
RFC3P40938 AL445584.1-201ENST00000431451 330 ntBASIC3.68□□□□□ -1.82
RFC3P40938 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.68□□□□□ -1.82
RFC3P40938 AL031663.1-201ENST00000437445 219 ntBASIC3.68□□□□□ -1.82
RFC3P40938 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.68□□□□□ -1.82
RFC3P40938 AC093770.1-201ENST00000511559 571 ntBASIC3.68□□□□□ -1.82
RFC3P40938 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.68□□□□□ -1.82
RFC3P40938 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.68□□□□□ -1.82
RFC3P40938 HSPE1P5-201ENST00000561489 272 ntBASIC3.68□□□□□ -1.82
RFC3P40938 AC106785.3-201ENST00000564064 847 ntBASIC3.68□□□□□ -1.82
RFC3P40938 MIR4429-201ENST00000580105 73 ntBASIC3.68□□□□□ -1.82
RFC3P40938 AC012417.1-201ENST00000582307 1039 ntBASIC3.68□□□□□ -1.82
RFC3P40938 AC114878.2-201ENST00000604863 1251 ntBASIC3.68□□□□□ -1.82
RFC3P40938 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.68□□□□□ -1.82
RFC3P40938 AL592436.1-201ENST00000605135 558 ntBASIC3.68□□□□□ -1.82
RFC3P40938 AL034351.1-201ENST00000605288 668 ntBASIC3.68□□□□□ -1.82
RFC3P40938 AC064801.1-201ENST00000612025 407 ntBASIC3.68□□□□□ -1.82
RFC3P40938 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RFC3P40938 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RFC3P40938 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.68□□□□□ -1.82
RFC3P40938 ERCC6-202ENST00000374127 1782 ntBASIC3.68□□□□□ -1.82
RFC3P40938 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RFC3P40938 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RFC3P40938 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.68□□□□□ -1.82
RFC3P40938 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RFC3P40938 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms