Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 RNU6-1279P-201ENST00000383917 103 ntBASIC4.83□□□□□ -1.64
USP6P35125 RN7SKP111-201ENST00000410349 271 ntBASIC4.83□□□□□ -1.64
USP6P35125 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.83□□□□□ -1.64
USP6P35125 AC236972.1-201ENST00000433225 199 ntBASIC4.83□□□□□ -1.64
USP6P35125 ATP5HP2-201ENST00000433885 485 ntBASIC4.83□□□□□ -1.64
USP6P35125 NPM1P39-201ENST00000449818 867 ntBASIC4.83□□□□□ -1.64
USP6P35125 BTF3P5-201ENST00000457252 467 ntBASIC4.83□□□□□ -1.64
USP6P35125 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.83□□□□□ -1.64
USP6P35125 RPL21P13-201ENST00000488305 481 ntBASIC4.83□□□□□ -1.64
USP6P35125 AC109458.1-201ENST00000508858 316 ntBASIC4.83□□□□□ -1.64
USP6P35125 RNU6-751P-201ENST00000516382 101 ntBASIC4.83□□□□□ -1.64
USP6P35125 RN7SKP83-201ENST00000516512 178 ntBASIC4.83□□□□□ -1.64
USP6P35125 RNU6-579P-201ENST00000516879 102 ntBASIC4.83□□□□□ -1.64
USP6P35125 RN7SKP209-201ENST00000516888 304 ntBASIC4.83□□□□□ -1.64
USP6P35125 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.83□□□□□ -1.64
USP6P35125 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.83□□□□□ -1.64
USP6P35125 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP6P35125 MTATP6P25-201ENST00000574491 261 ntBASIC4.83□□□□□ -1.64
USP6P35125 MIR4433B-201ENST00000581329 102 ntBASIC4.83□□□□□ -1.64
USP6P35125 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.83□□□□□ -1.64
USP6P35125 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.83□□□□□ -1.64
USP6P35125 MIR6852-201ENST00000621699 66 ntBASIC4.83□□□□□ -1.64
USP6P35125 AP003355.3-201ENST00000623465 114 ntBASIC4.83□□□□□ -1.64
USP6P35125 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.83□□□□□ -1.64
USP6P35125 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP6P35125 AC058791.1-201ENST00000608412 3198 ntBASIC4.83□□□□□ -1.64
USP6P35125 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP6P35125 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP6P35125 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP6P35125 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP6P35125 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
USP6P35125 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
USP6P35125 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
USP6P35125 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP6P35125 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
USP6P35125 RNU6-1331P-201ENST00000363658 106 ntBASIC4.82□□□□□ -1.64
USP6P35125 RHOT1P2-201ENST00000366423 333 ntBASIC4.82□□□□□ -1.64
USP6P35125 Y_RNA.500-201ENST00000384466 111 ntBASIC4.82□□□□□ -1.64
USP6P35125 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.82□□□□□ -1.64
USP6P35125 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.82□□□□□ -1.64
USP6P35125 MTND6P5-201ENST00000448266 512 ntBASIC4.82□□□□□ -1.64
USP6P35125 AC073522.1-201ENST00000483312 377 ntBASIC4.82□□□□□ -1.64
USP6P35125 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP6P35125 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.82□□□□□ -1.64
USP6P35125 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP6P35125 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.82□□□□□ -1.64
USP6P35125 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.82□□□□□ -1.64
USP6P35125 AC011816.2-201ENST00000607089 556 ntBASIC4.82□□□□□ -1.64
USP6P35125 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP6P35125 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP6P35125 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.82□□□□□ -1.64
USP6P35125 AL035425.3-201ENST00000564206 4996 ntBASIC4.82□□□□□ -1.64
USP6P35125 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.82□□□□□ -1.64
USP6P35125 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP6P35125 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP6P35125 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.82□□□□□ -1.64
USP6P35125 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
USP6P35125 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.81□□□□□ -1.64
USP6P35125 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
USP6P35125 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP6P35125 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
USP6P35125 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
USP6P35125 AJ239321.1-201ENST00000424255 564 ntBASIC4.81□□□□□ -1.64
USP6P35125 AC006994.1-201ENST00000438212 839 ntBASIC4.81□□□□□ -1.64
USP6P35125 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.81□□□□□ -1.64
USP6P35125 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.81□□□□□ -1.64
USP6P35125 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.81□□□□□ -1.64
USP6P35125 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.81□□□□□ -1.64
USP6P35125 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.81□□□□□ -1.64
USP6P35125 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP6P35125 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP6P35125 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
USP6P35125 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP6P35125 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
USP6P35125 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP6P35125 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
USP6P35125 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
USP6P35125 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP6P35125 AL512649.1-201ENST00000428997 581 ntBASIC4.8□□□□□ -1.64
USP6P35125 AC092809.1-201ENST00000441469 474 ntBASIC4.8□□□□□ -1.64
USP6P35125 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.8□□□□□ -1.64
USP6P35125 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.8□□□□□ -1.64
USP6P35125 GOLGA5P1-201ENST00000507317 980 ntBASIC4.8□□□□□ -1.64
USP6P35125 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP6P35125 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
USP6P35125 AC010342.1-201ENST00000514047 877 ntBASIC4.8□□□□□ -1.64
USP6P35125 RNA5SP154-201ENST00000516193 111 ntBASIC4.8□□□□□ -1.64
USP6P35125 AL121766.1-201ENST00000547436 487 ntBASIC4.8□□□□□ -1.64
USP6P35125 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.8□□□□□ -1.64
USP6P35125 AP003392.5-201ENST00000607857 415 ntBASIC4.8□□□□□ -1.64
USP6P35125 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.8□□□□□ -1.64
USP6P35125 AC241377.1-201ENST00000619797 406 ntBASIC4.8□□□□□ -1.64
USP6P35125 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.8□□□□□ -1.64
USP6P35125 MFSD8-233ENST00000641482 4860 ntBASIC4.8□□□□□ -1.64
USP6P35125 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.8□□□□□ -1.64
USP6P35125 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
USP6P35125 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
USP6P35125 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
USP6P35125 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP6P35125 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms